RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 SIGLEC6O43699 453 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 VAPBO95292 243 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 LDOC1O95751 146 aaPredicted RBP20.5■□□□□ 0.87
DNMT1-227ENST00000592342 POLBP06746 335 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 PGAM1P18669 254 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 AK4P27144 223 aaPredicted RBP20.5■□□□□ 0.87
DNMT1-227ENST00000592342 ACTR1BP42025 376 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 ID4P47928 161 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 NOVA1P51513 510 aaKnown RBP20.5■□□□□ 0.87
DNMT1-227ENST00000592342 ACTR1AP61163 376 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 CAV1Q03135 178 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 INSCQ1MX18 579 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 PLA2G4EQ3MJ16 856 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 ANKRD20A4Q4UJ75 823 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 GLE1Q53GS7 698 aaKnown RBP20.5■□□□□ 0.87
DNMT1-227ENST00000592342 LYPLAL1Q5VWZ2 237 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 SLC30A9Q6PML9 568 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 LVRNQ6Q4G3 990 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 TMEM220Q6QAJ8 160 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 RASGEF1AQ8N9B8 481 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 NOA1Q8NC60 698 aaKnown RBP20.5■□□□□ 0.87
DNMT1-227ENST00000592342 FAM46DQ8NEK8 389 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 GPBAR1Q8TDU6 330 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 GLMNQ92990 594 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 ZNF514Q96K75 400 aaPredicted RBP20.5■□□□□ 0.87
DNMT1-227ENST00000592342 CNDP2Q96KP4 475 aaKnown RBP20.5■□□□□ 0.87
DNMT1-227ENST00000592342 PWWP2AQ96N64 755 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 GPR34Q9UPC5 381 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 PLEKHM1Q9Y4G2 1056 aa20.5■□□□□ 0.87
DNMT1-227ENST00000592342 ZNF106Q9H2Y7 1883 aaKnown RBP20.5■□□□□ 0.87
DNMT1-227ENST00000592342 FRYLO94915 3013 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 TDRD6O60522 2096 aaKnown RBP20.49■□□□□ 0.87
DNMT1-227ENST00000592342 TRIM38O00635 465 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 BANF1O75531 89 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 USP1O94782 785 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 VCLP18206 1134 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 PLTPP55058 493 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 DAB2P98082 770 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 GUCY2DQ02846 1103 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 TRIP6Q15654 476 aaKnown RBP20.49■□□□□ 0.87
DNMT1-227ENST00000592342 DBN1Q16643 649 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 MSS51Q4VC12 460 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 C6orf132Q5T0Z8 1188 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 KIAA0930Q6ICG6 404 aaPredicted RBP20.49■□□□□ 0.87
DNMT1-227ENST00000592342 ZCCHC8Q6NZY4 707 aaKnown RBP20.49■□□□□ 0.87
DNMT1-227ENST00000592342 CERS6Q6ZMG9 384 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 PIANPQ8IYJ0 282 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 SGSM3Q96HU1 749 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 EBNA1BP2Q99848 306 aaKnown RBP20.49■□□□□ 0.87
DNMT1-227ENST00000592342 TRIM56Q9BRZ2 755 aaKnown RBP20.49■□□□□ 0.87
DNMT1-227ENST00000592342 NAT9Q9BTE0 207 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 DPEP2Q9H4A9 486 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 EVA1BQ9NVM1 165 aa20.49■□□□□ 0.87
DNMT1-227ENST00000592342 PCYT1BQ9Y5K3 369 aaPredicted RBP20.49■□□□□ 0.87
DNMT1-227ENST00000592342 CD3EAPO15446 510 aaKnown RBP20.48■□□□□ 0.87
DNMT1-227ENST00000592342 CBFA2T3O75081 653 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 GIMD1P0DJR0 217 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 CEACAM1P13688 526 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 ATP1B2P14415 290 aaPredicted RBP20.48■□□□□ 0.87
DNMT1-227ENST00000592342 ZNF7P17097 686 aaPredicted RBP20.48■□□□□ 0.87
DNMT1-227ENST00000592342 PMLP29590 882 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 CTSCP53634 463 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 PDIA2Q13087 525 aaKnown RBP20.48■□□□□ 0.87
DNMT1-227ENST00000592342 THOC5Q13769 683 aaKnown RBP20.48■□□□□ 0.87
DNMT1-227ENST00000592342 ITIH4Q14624 930 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 SMAD1Q15797 465 aaKnown RBP20.48■□□□□ 0.87
DNMT1-227ENST00000592342 HP1BP3Q5SSJ5 553 aaPredicted RBP20.48■□□□□ 0.87
DNMT1-227ENST00000592342 MRNIPQ6NTE8 343 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 CENPUQ71F23 418 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 SDCCAG8Q86SQ7 713 aaPredicted RBP20.48■□□□□ 0.87
DNMT1-227ENST00000592342 TMEM135Q86UB9 458 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 CCNJLQ8IV13 435 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 AGGF1Q8N302 714 aaeCLIP20.48■□□□□ 0.87
DNMT1-227ENST00000592342 LRRC39Q96DD0 335 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 SGF29Q96ES7 293 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 OSGEPL1Q9H4B0 414 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 KLC4Q9NSK0 619 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 GRHL1Q9NZI5 618 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 TAAR2Q9P1P5 351 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 SIRPGQ9P1W8 387 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 GULP1Q9UBP9 304 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 CHMP2BQ9UQN3 213 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 KCNK6Q9Y257 313 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 DNAJC16Q9Y2G8 782 aa20.48■□□□□ 0.87
DNMT1-227ENST00000592342 LRP4O75096 1905 aa20.47■□□□□ 0.87
DNMT1-227ENST00000592342 ESYT3A0FGR9 886 aa20.47■□□□□ 0.87
DNMT1-227ENST00000592342 PFDN6O15212 129 aa20.47■□□□□ 0.87
DNMT1-227ENST00000592342 KCNK5O95279 499 aa20.47■□□□□ 0.87
DNMT1-227ENST00000592342 TTC4O95801 387 aa20.47■□□□□ 0.87
DNMT1-227ENST00000592342 ELK3P41970 407 aa20.47■□□□□ 0.87
DNMT1-227ENST00000592342 NSG1P42857 185 aa20.47■□□□□ 0.87
DNMT1-227ENST00000592342 RPIAP49247 311 aa20.47■□□□□ 0.87
DNMT1-227ENST00000592342 DRG2P55039 364 aaKnown RBP20.47■□□□□ 0.87
DNMT1-227ENST00000592342 LONRF1Q17RB8 773 aa20.47■□□□□ 0.87
DNMT1-227ENST00000592342 NRROSQ86YC3 692 aa20.47■□□□□ 0.87
DNMT1-227ENST00000592342 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.47■□□□□ 0.87
DNMT1-227ENST00000592342 BAHD1Q8TBE0 780 aaPredicted RBP20.47■□□□□ 0.87
DNMT1-227ENST00000592342 ART4Q93070 314 aa20.47■□□□□ 0.87
DNMT1-227ENST00000592342 CFAP36Q96G28 342 aa20.47■□□□□ 0.87
DNMT1-227ENST00000592342 APOLD1Q96LR9 279 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms