RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 TTC30BQ8N4P2 665 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 TC2NQ8N9U0 490 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 OXNAD1Q96HP4 312 aaPredicted RBP14.13□□□□□ -0.15
VMP1-206ENST00000587945 ANP32EQ9BTT0 268 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 SLC12A9Q9BXP2 914 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.13□□□□□ -0.15
VMP1-206ENST00000587945 C10orf88Q9H8K7 445 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 KLHL8Q9P2G9 620 aaPredicted RBP14.13□□□□□ -0.15
VMP1-206ENST00000587945 ZNF624Q9P2J8 865 aaPredicted RBP14.13□□□□□ -0.15
VMP1-206ENST00000587945 TRIM10Q9UDY6 481 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 SLC30A1Q9Y6M5 507 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 PIEZO2Q9H5I5 2752 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 SCN8AQ9UQD0 1980 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 hCG_1818297A0A087WSY0 165 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 LILRA5A6NI73 299 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 GPR89AB7ZAQ6 455 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 GPR39O43194 453 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 BUD23O43709 281 aaKnown RBP14.12□□□□□ -0.15
VMP1-206ENST00000587945 SLC28A2O43868 658 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 VEGFDO43915 354 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 UGT1A9O60656 530 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 VIPP01282 170 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 GPR89BP0CG08 455 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 BRAFP15056 766 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 ITGB6P18564 788 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 XRCC1P18887 633 aaPredicted RBP14.12□□□□□ -0.15
VMP1-206ENST00000587945 UGT1A6P19224 532 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 UGT1A1P22309 533 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 UGT1A4P22310 534 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 CA5AP35218 305 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 DRG2P55039 364 aaKnown RBP14.12□□□□□ -0.15
VMP1-206ENST00000587945 TMEM26Q6ZUK4 368 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 PID1Q7Z2X4 250 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 PRICKLE2Q7Z3G6 844 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 TRAPPC5Q8IUR0 188 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 CCDC50Q8IVM0 306 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 TRIM48Q8IWZ4 208 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 UNC5BQ8IZJ1 945 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 ZNF567Q8N184 647 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 IPMKQ8NFU5 416 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 GDAP1Q8TB36 358 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 KRT35Q92764 455 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 P3H4Q92791 437 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 MRGPRX2Q96LB1 330 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 HEMGNQ9BXL5 484 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 SPRY4Q9C004 299 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 UGT1A7Q9HAW7 530 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 UGT1A10Q9HAW8 530 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 UGT1A8Q9HAW9 530 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 IL26Q9NPH9 171 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 PILRAQ9UKJ1 303 aa14.12□□□□□ -0.15
VMP1-206ENST00000587945 PRR19A6NJB7 356 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 OR52A4PA6NMU1 304 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 UBXN7O94888 489 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 ZRANB2O95218 330 aaKnown RBP eCLIP14.11□□□□□ -0.15
VMP1-206ENST00000587945 AMD1P17707 334 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 HADHBP55084 474 aaKnown RBP14.11□□□□□ -0.15
VMP1-206ENST00000587945 TMEM115Q12893 351 aaPredicted RBP14.11□□□□□ -0.15
VMP1-206ENST00000587945 CHRNA6Q15825 494 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 TFDP3Q5H9I0 405 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 FAM151BQ6UXP7 276 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 TIPARPQ7Z3E1 657 aaKnown RBP14.11□□□□□ -0.15
VMP1-206ENST00000587945 C11orf96Q7Z7L8 435 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 PLXDC1Q8IUK5 500 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 KATNAL2Q8IYT4 538 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 RCOR2Q8IZ40 523 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 BLOC1S5Q8TDH9 187 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 TGM7Q96PF1 710 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 QKIQ96PU8 341 aaKnown RBP eCLIP14.11□□□□□ -0.158e-15■■■■■ 49.6
VMP1-206ENST00000587945 VPS35Q96QK1 796 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 FCRL5Q96RD9 977 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 SRPK1Q96SB4 655 aaKnown RBP14.11□□□□□ -0.15
VMP1-206ENST00000587945 TIMM29Q9BSF4 260 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 TRIM5Q9C035 493 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 EPB41L1Q9H4G0 881 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 UCK1Q9HA47 277 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 FBXO8Q9NRD0 319 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 WDR37Q9Y2I8 494 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 PCDHA13Q9Y5I0 950 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 COL6A6A6NMZ7 2263 aa14.11□□□□□ -0.15
VMP1-206ENST00000587945 LOC101059948A0A1B0GTJ6 334 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 MTSS1O43312 755 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 STK17BO94768 372 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 EPOP01588 193 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 HMGCLP35914 325 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 LEPRP48357 1165 aaKnown RBP14.1□□□□□ -0.15
VMP1-206ENST00000587945 SEPHS1P49903 392 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 CTSCP53634 463 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 PTPRCAPQ14761 206 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 SLC1A5Q15758 541 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 ABRAXAS1Q6UWZ7 409 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 XKR5Q6UX68 686 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 CEACAM20Q6UY09 585 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 GLT6D1Q7Z4J2 308 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 NLGN4XQ8N0W4 816 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 AVL9Q8NBF6 648 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 NLGN4YQ8NFZ3 816 aaPredicted RBP14.1□□□□□ -0.15
VMP1-206ENST00000587945 RSC1A1Q92681 617 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 C9orf72Q96LT7 481 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 TEFMQ96QE5 360 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms