RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 HACD3Q9P035 362 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 ZNF624Q9P2J8 865 aaPredicted RBP17.18■□□□□ 0.34
SMG6-214ENST00000573827 CPNE7Q9UBL6 633 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 RSPH14Q9UHP6 348 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 PCDHGA3Q9Y5H0 932 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 FLNBO75369 2602 aaKnown RBP17.18■□□□□ 0.34
SMG6-214ENST00000573827 H7C0C1 242 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 TK2O00142 265 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 DDX3YO15523 660 aaKnown RBP17.17■□□□□ 0.34
SMG6-214ENST00000573827 BUD23O43709 281 aaKnown RBP17.17■□□□□ 0.34
SMG6-214ENST00000573827 VEGFDO43915 354 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 RBP3P10745 1247 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 ZNF7P17097 686 aaPredicted RBP17.17■□□□□ 0.34
SMG6-214ENST00000573827 CDC25BP30305 580 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 ATP5OP48047 213 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 KLF1Q13351 362 aaPredicted RBP17.17■□□□□ 0.34
SMG6-214ENST00000573827 NFATC2Q13469 925 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 PTPRCAPQ14761 206 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 CHRNA6Q15825 494 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 ANKRD20A2Q5SQ80 823 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 ANKRD20A1Q5TYW2 823 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 ANKRD20A3Q5VUR7 823 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 BROXQ5VW32 411 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 DENND5AQ6IQ26 1287 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 WDR74Q6RFH5 385 aaPredicted RBP17.17■□□□□ 0.34
SMG6-214ENST00000573827 XKR5Q6UX68 686 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 ARHGAP22Q7Z5H3 698 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 ZFAND4Q86XD8 727 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 JAMLQ86YT9 394 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 SLC38A3Q99624 504 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 DPYSL5Q9BPU6 564 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 DESI2Q9BSY9 194 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 UCK1Q9HA47 277 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 SMOXQ9NWM0 555 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 OGFRQ9NZT2 677 aa17.17■□□□□ 0.34
SMG6-214ENST00000573827 LILRA5A6NI73 299 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 OR5K4A6NMS3 321 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 KMOO15229 486 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 ZW10O43264 779 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 UGT1A9O60656 530 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 SNX2O60749 519 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 CDK14O94921 469 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 PRB1P04280 392 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 LIPCP11150 499 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 XRCC1P18887 633 aaPredicted RBP17.16■□□□□ 0.34
SMG6-214ENST00000573827 UGT1A6P19224 532 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 WT1P19544 449 aaPredicted RBP17.16■□□□□ 0.34
SMG6-214ENST00000573827 UGT1A1P22309 533 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 UGT1A4P22310 534 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 PSMB4P28070 264 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 UGT1A3P35503 534 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 SPAM1P38567 509 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 SLC19A1P41440 591 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 CTSCP53634 463 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 EPHA4P54764 986 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 EIF3EP60228 445 aaKnown RBP17.16■□□□□ 0.34
SMG6-214ENST00000573827 TMEM115Q12893 351 aaPredicted RBP17.16■□□□□ 0.34
SMG6-214ENST00000573827 PLA2G4EQ3MJ16 856 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 ABRAXAS1Q6UWZ7 409 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 WASH2PQ6VEQ5 465 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 LRRTM4Q86VH4 590 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 CDKL3Q8IVW4 592 aaPredicted RBP17.16■□□□□ 0.34
SMG6-214ENST00000573827 DDHD1Q8NEL9 900 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 BLOC1S5Q8TDH9 187 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 SLC39A7Q92504 469 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 SPATA13Q96N96 652 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 CCNL2Q96S94 520 aaPredicted RBP17.16■□□□□ 0.34
SMG6-214ENST00000573827 FICDQ9BVA6 458 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 TBC1D10AQ9BXI6 508 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 UGT1A7Q9HAW7 530 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 UGT1A10Q9HAW8 530 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 UGT1A8Q9HAW9 530 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 WASH6PQ9NQA3 447 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 OCIAD1Q9NX40 245 aa17.16■□□□□ 0.34
SMG6-214ENST00000573827 ZNF106Q9H2Y7 1883 aaKnown RBP17.16■□□□□ 0.34
SMG6-214ENST00000573827 ERVH48-1M5A8F1 160 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 DUX1O43812 170 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 IPO7O95373 1038 aaKnown RBP17.15■□□□□ 0.34
SMG6-214ENST00000573827 MAPK10P53779 464 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 GEMP55040 296 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 BIRC2Q13490 618 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 AGAP9Q5VTM2 703 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 ZDHHC20Q5W0Z9 365 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 FAM151BQ6UXP7 276 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 GLT6D1Q7Z4J2 308 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 SLC9B2Q86UD5 537 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 RASGEF1AQ8N9B8 481 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 AGBL5Q8NDL9 886 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 OR10G6Q8NH81 332 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 CCDC110Q8TBZ0 833 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 SPRY4Q9C004 299 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 PACSIN2Q9UNF0 486 aaPredicted RBP17.15■□□□□ 0.34
SMG6-214ENST00000573827 R3HDM2Q9Y2K5 976 aaKnown RBP17.15■□□□□ 0.34
SMG6-214ENST00000573827 KCTD3Q9Y597 815 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 ARL5AQ9Y689 179 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 SLC30A1Q9Y6M5 507 aa17.15■□□□□ 0.34
SMG6-214ENST00000573827 MN1Q10571 1320 aaPredicted RBP17.15■□□□□ 0.34
SMG6-214ENST00000573827 GLYATL1P3A0A0U1RQE8 302 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 TCRBV7S2A1N4TA0A589 114 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 AGAP14A8MT82 685 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms