RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 TMPRSS11EQ9UL52 423 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 AAR2Q9Y312 384 aaKnown RBP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 PKP3Q9Y446 797 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 LOXL2Q9Y4K0 774 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 PCYT1BQ9Y5K3 369 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 ADGRG1Q9Y653 693 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 PIEZO2Q9H5I5 2752 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 CELSR3Q9NYQ7 3312 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 TEX51A0A1B0GUA7 166 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 A6NCN8 305 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 GOLGA6L9A6NEM1 432 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 C5orf60A6NFR6 353 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 C2orf81A6NN90 581 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 GOLGA6L6A8MZA4 724 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 HGSO14964 777 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 STX7O15400 261 aaKnown RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 KCNN4O15554 427 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 UGT1A9O60656 530 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 ZNF189O75820 626 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 PTMAP06454 111 aaKnown RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 CCL4P13236 92 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 F3P13726 295 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 HOXB3P14651 431 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 XRCC1P18887 633 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 UGT1A6P19224 532 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 LPOP22079 712 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 UGT1A1P22309 533 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 UGT1A4P22310 534 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 ADRA1AP35348 466 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 UGT1A3P35503 534 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 SPAM1P38567 509 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 ETV5P41161 510 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 PPM1FP49593 454 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 MAPK10P53779 464 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 CXADRP78310 365 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 HHEXQ03014 270 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 CFHR1Q03591 330 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 VAC14Q08AM6 782 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 TMEM115Q12893 351 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 NFATC2Q13469 925 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 GTF2H3Q13889 308 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 C16orf72Q14CZ0 275 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 TAF1AQ15573 450 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 CHRNA6Q15825 494 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 INSCQ1MX18 579 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 ATP13A5Q4VNC0 1218 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 KHDC1Q4VXA5 237 aaKnown RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 LDLRAP1Q5SW96 308 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 ARHGAP40Q5TG30 622 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 TMEM164Q5U3C3 297 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 AADACL2Q6P093 401 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 TMEM71Q6P5X7 295 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 WDR74Q6RFH5 385 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 CRTC3Q6UUV7 619 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 GLT6D1Q7Z4J2 308 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 ZNF761Q86XN6 746 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 RNF10Q8N5U6 811 aaKnown RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 AVL9Q8NBF6 648 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 AGBL5Q8NDL9 886 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 GDAP1Q8TB36 358 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 NCSTNQ92542 709 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 USP7Q93009 1102 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 CCDC74BQ96LY2 380 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 PPP1R2P1Q96PQ5 205 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 UBL7Q96S82 380 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 FAM118BQ9BPY3 351 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 DESI2Q9BSY9 194 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 FICDQ9BVA6 458 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 OSGEPL1Q9H4B0 414 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 STN1Q9H668 368 aaKnown RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 UGT1A7Q9HAW7 530 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 UGT1A10Q9HAW8 530 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 UGT1A8Q9HAW9 530 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 CPNE5Q9HCH3 593 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 SARS2Q9NP81 518 aaKnown RBP6.82□□□□□ -1.32
SF3B3-209ENST00000567635 PDP2Q9P2J9 529 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 CPNE7Q9UBL6 633 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 TRIM10Q9UDY6 481 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 ACSL6Q9UKU0 697 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 WDFY3Q8IZQ1 3526 aa6.82□□□□□ -1.32
SF3B3-209ENST00000567635 CCDC88CQ9P219 2028 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 PRAMEF33A0A0G2JMD5 474 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 GLYATL1P3A0A0U1RQE8 302 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 A0A0U1RQJ8 604 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 EIF4E1BA6NMX2 242 aaKnown RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 TK2O00142 265 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 ATXN7O15265 892 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 DDX3YO15523 660 aaKnown RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 PSMD3O43242 534 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 BUD23O43709 281 aaKnown RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 DUX1O43812 170 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 PRAMEF10O60809 474 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 KCNJ13O60928 360 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 MTX2O75431 263 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 CRTAMO95727 393 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 FTCDO95954 541 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 FGF3P11487 239 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 VCLP18206 1134 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 ITIH1P19827 911 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms