RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 PSMG2Q969U7 264 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 TBATAQ96M53 351 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 ATOH8Q96SQ7 321 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 CIB1Q99828 191 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 RBM4BQ9BQ04 359 aaKnown RBP7.57□□□□□ -1.2
ATXN3-249ENST00000564606 RTP3Q9BQQ7 232 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 TMEM175Q9BSA9 504 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 RBM4Q9BWF3 364 aaKnown RBP7.57□□□□□ -1.2
ATXN3-249ENST00000564606 RBM38Q9H0Z9 239 aaKnown RBP7.57□□□□□ -1.2
ATXN3-249ENST00000564606 CXCL16Q9H2A7 254 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 MAGIXQ9H6Y5 334 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 UBAP1Q9NZ09 502 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 MPP6Q9NZW5 540 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 RGS17Q9UGC6 210 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-249ENST00000564606 ZNHIT2Q9UHR6 403 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 GNPTGQ9UJJ9 305 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 C3orf18Q9UK00 162 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 BAG5Q9UL15 447 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 CDH7Q9ULB5 785 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 FADS3Q9Y5Q0 445 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 CEPT1Q9Y6K0 416 aa7.57□□□□□ -1.2
ATXN3-249ENST00000564606 OAS3Q9Y6K5 1087 aaKnown RBP7.57□□□□□ -1.2
ATXN3-249ENST00000564606 FNDC1Q4ZHG4 1894 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-249ENST00000564606 POLR2AP24928 1970 aaKnown RBP7.57□□□□□ -1.2
ATXN3-249ENST00000564606 A0A1B0GVM2 712 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 TMEM233B4DJY2 109 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 I6L893 689 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 BTN3A1O00481 513 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 GNGT2O14610 69 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 KPNA5O15131 536 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ARPC2O15144 300 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ACSL4O60488 711 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 PEX11BO96011 259 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 IGLV3-27P01718 113 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 KRT6AP02538 564 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CHRNA1P02708 482 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 KRT6BP04259 564 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ALDH2P05091 517 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 RHOCP08134 193 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ATXN1LP0C7T5 689 aaKnown RBP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 PRR35P0CG20 571 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CBSLP0DN79 551 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CHRM3P20309 590 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 RPS3P23396 243 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 SLC6A2P23975 617 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 MAP4P27816 1152 aaKnown RBP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CD52P31358 61 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CBSP35520 551 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ARL1P40616 181 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 OR1G1P47890 313 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 KRT6CP48668 564 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 HLCSP50747 726 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CCT8P50990 548 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ALDH3A2P51648 485 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 PLK1P53350 603 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CDKN2DP55273 166 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 SH3BP2P78314 561 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 BEX3Q00994 111 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 LIPEQ05469 1076 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CACNG1Q06432 222 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 GRSF1Q12849 480 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 GPR17Q13304 367 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 PWP1Q13610 501 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ITGA7Q13683 1181 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 SMAD1Q15797 465 aaKnown RBP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 TAF12Q16514 161 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 IMPG1Q17R60 797 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 DPY19L1Q2PZI1 675 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ZNF829Q3KNS6 432 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 PLA2G4EQ3MJ16 856 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 VPS26BQ4G0F5 336 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 C6orf10Q5SRN2 563 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 RAP1GAP2Q684P5 730 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 SULT1C3Q6IMI6 304 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 LAYNQ6UX15 382 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CYP2R1Q6VVX0 501 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 EP400NLQ6ZTU2 488 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 KDELC2Q7Z4H8 507 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 TFAP2DQ7Z6R9 452 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 HIPK1Q86Z02 1210 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 FAM126BQ8IXS8 530 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ZNF683Q8IZ20 524 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 C8orf59Q8N0T1 100 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 RBFAQ8N0V3 343 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 EID3Q8N140 333 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CLEC4FQ8N1N0 589 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 TMEM130Q8N3G9 435 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 TTC30BQ8N4P2 665 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CBR4Q8N4T8 237 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ZNF557Q8N988 423 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 PHC3Q8NDX5 983 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 C3orf58Q8NDZ4 430 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ACVR1CQ8NER5 493 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 SCAMP5Q8TAC9 235 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ITFG1Q8TB96 612 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 METTL6Q8TCB7 284 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CYGBQ8WWM9 190 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 S100ZQ8WXG8 99 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CCDC138Q96M89 665 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms