RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 PHOSPHO2Q8TCD6 241 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 SCRN2Q96FV2 425 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 TUBGCP5Q96RT8 1024 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 NPAS2Q99743 824 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 STX18Q9P2W9 335 aaKnown RBP18.91■□□□□ 0.62
SMPD3-203ENST00000563226 CRLS1Q9UJA2 301 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 STX16-NPEPL1H3BU86 382 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 STX16O14662 325 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 ALDOCP09972 364 aaKnown RBP18.91■□□□□ 0.62
SMPD3-203ENST00000563226 HOXA9P31269 272 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 MTTPP55157 894 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 SQLEQ14534 574 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 RBM23Q86U06 439 aaKnown RBP18.91■□□□□ 0.62
SMPD3-203ENST00000563226 ADGRG2Q8IZP9 1017 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 FBXW8Q8N3Y1 598 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 ZNF483Q8TF39 744 aaPredicted RBP18.91■□□□□ 0.62
SMPD3-203ENST00000563226 CYB5D2Q8WUJ1 264 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 ZNF707Q96C28 371 aaPredicted RBP18.91■□□□□ 0.62
SMPD3-203ENST00000563226 LRRC3BQ96PB8 259 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 CEP44Q9C0F1 390 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 ABCG8Q9H221 673 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 AKTIPQ9H8T0 292 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 CD274Q9NZQ7 290 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 EIF2B4Q9UI10 523 aaKnown RBP18.91■□□□□ 0.62
SMPD3-203ENST00000563226 ZNF225Q9UK10 706 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 POMPQ9Y244 141 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 BTRCQ9Y297 605 aa18.91■□□□□ 0.62
SMPD3-203ENST00000563226 C5orf42Q9H799 3197 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 GRXCR1A8MXD5 290 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 C5orf67F2Z3F1 127 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 XYLBO75191 536 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 RPSAP08865 295 aaKnown RBP18.9■□□□□ 0.62
SMPD3-203ENST00000563226 DPP6P42658 865 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 PTSQ03393 145 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 UBE3AQ05086 875 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 SLC34A1Q06495 639 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 CCNIQ14094 377 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 PTK2BQ14289 1009 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 TGFBIQ15582 683 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 C18orf21Q32NC0 220 aaPredicted RBP18.9■□□□□ 0.62
SMPD3-203ENST00000563226 GRAMD4Q6IC98 578 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 ELMSAN1Q6PJG2 1045 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 ZNF570Q96NI8 536 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 MCCC1Q96RQ3 725 aaPredicted RBP18.9■□□□□ 0.62
SMPD3-203ENST00000563226 C19orf43Q9BQ61 176 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 C1QTNF3Q9BXJ4 246 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 CPEB1Q9BZB8 566 aaKnown RBP18.9■□□□□ 0.62
SMPD3-203ENST00000563226 GNPTGQ9UJJ9 305 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 PPIL1Q9Y3C6 166 aa18.9■□□□□ 0.62
SMPD3-203ENST00000563226 GPC4O75487 556 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 SLC25A14O95258 325 aaPredicted RBP18.89■□□□□ 0.62
SMPD3-203ENST00000563226 TRIM16O95361 564 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 POP4O95707 220 aaKnown RBP18.89■□□□□ 0.62
SMPD3-203ENST00000563226 HSPA1AP0DMV8 641 aaKnown RBP18.89■□□□□ 0.62
SMPD3-203ENST00000563226 HSPA1BP0DMV9 641 aaKnown RBP18.89■□□□□ 0.62
SMPD3-203ENST00000563226 ENO3P13929 434 aaPredicted RBP18.89■□□□□ 0.62
SMPD3-203ENST00000563226 FASTKQ14296 549 aaKnown RBP18.89■□□□□ 0.62
SMPD3-203ENST00000563226 SBSNQ6UWP8 590 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 USP45Q70EL2 814 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 RTL10Q7L3V2 364 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 SYVN1Q86TM6 617 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 KIRREL3Q8IZU9 778 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 NXPE1Q8N323 547 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 CBARPQ8N350 705 aaPredicted RBP18.89■□□□□ 0.62
SMPD3-203ENST00000563226 OR9I1Q8NGQ6 314 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 OR2A12Q8NGT7 310 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 ITFG1Q8TB96 612 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 STOML1Q9UBI4 398 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 TIMM22Q9Y584 194 aa18.89■□□□□ 0.62
SMPD3-203ENST00000563226 SNX2O60749 519 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 HNRNPA1P09651 372 aaKnown RBP eCLIP18.89■□□□□ 0.61
SMPD3-203ENST00000563226 C1SP09871 688 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 WEE1P30291 646 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 GRB7Q14451 532 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 AGKQ53H12 422 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 FAM109BQ6ICB4 259 aaPredicted RBP18.89■□□□□ 0.61
SMPD3-203ENST00000563226 C16orf89Q6UX73 402 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 PHYKPLQ8IUZ5 450 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 DDIASQ8IXT1 998 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 ASIC4Q96FT7 647 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 PDLIM5Q96HC4 596 aaKnown RBP18.89■□□□□ 0.61
SMPD3-203ENST00000563226 KLHL32Q96NJ5 620 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 MTG2Q9H4K7 406 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 BRD9Q9H8M2 597 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 CCDC167Q9P0B6 97 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 TBC1D14Q9P2M4 693 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 B4GALT6Q9UBX8 382 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 PPM1HQ9ULR3 514 aa18.89■□□□□ 0.61
SMPD3-203ENST00000563226 ATG2AQ2TAZ0 1938 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 PSMD12O00232 456 aaPredicted RBP18.88■□□□□ 0.61
SMPD3-203ENST00000563226 E2F3O00716 465 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 LINC00032P0C843 101 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 TLDC1Q6P9B6 456 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 TXNDC11Q6PKC3 985 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 MRGPRX3Q96LB0 322 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 MCM8Q9UJA3 840 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 ERVW-1Q9UQF0 538 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 RWDD3Q9Y3V2 267 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 AGAP14A8MT82 685 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 TTC34A8MYJ7 566 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms