RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 GPR63Q9BZJ6 419 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 SLC25A51Q9H1U9 297 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 DEF6Q9H4E7 631 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 GPN2Q9H9Y4 310 aaPredicted RBP11.47□□□□□ -0.57
USP3-220ENST00000561381 MAGEE1Q9HCI5 957 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 BPIFA1Q9NP55 256 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 FBXO8Q9NRD0 319 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 UBP1Q9NZI7 540 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 ZNF624Q9P2J8 865 aaPredicted RBP11.47□□□□□ -0.57
USP3-220ENST00000561381 SAE1Q9UBE0 346 aaPredicted RBP11.47□□□□□ -0.57
USP3-220ENST00000561381 IL17BQ9UHF5 180 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 TMPRSS11EQ9UL52 423 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 SPO11Q9Y5K1 396 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 MN1Q10571 1320 aaPredicted RBP11.46□□□□□ -0.57
USP3-220ENST00000561381 SSU72P8A0A1W2PR75 194 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 LILRA5A6NI73 299 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 OR5K4A6NMS3 321 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 ZNF891A8MT65 544 aaPredicted RBP11.46□□□□□ -0.57
USP3-220ENST00000561381 ZNF487B1APH4 448 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 SMAPO00193 183 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 CHUKO15111 745 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 PMPCBO75439 489 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 STK17BO94768 372 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 BRAFP15056 766 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 ZNF7P17097 686 aaPredicted RBP11.46□□□□□ -0.57
USP3-220ENST00000561381 RPL10P27635 214 aaKnown RBP11.46□□□□□ -0.57
USP3-220ENST00000561381 LEPRP48357 1165 aaKnown RBP11.46□□□□□ -0.57
USP3-220ENST00000561381 NOMO1Q15155 1222 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 INSCQ1MX18 579 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 MFSD7Q6UXD7 560 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 CEACAM20Q6UY09 585 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 TMEM26Q6ZUK4 368 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 SLC45A3Q96JT2 553 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 ZSCAN5AQ9BUG6 496 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.46□□□□□ -0.57
USP3-220ENST00000561381 GLOD4Q9HC38 313 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 SIDT1Q9NXL6 827 aaKnown RBP11.46□□□□□ -0.57
USP3-220ENST00000561381 LCMT1Q9UIC8 334 aa11.46□□□□□ -0.57
USP3-220ENST00000561381 PRR19A6NJB7 356 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 OR52A4PA6NMU1 304 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 PDZK1P1A8MUH7 402 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 F5H423 210 aaPredicted RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 PPP1R12AO14974 1030 aaPredicted RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 POLR1CO15160 346 aaPredicted RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 KMOO15229 486 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 MTA2O94776 668 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 UBXN7O94888 489 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 NDST3O95803 873 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 DLGAP3O95886 979 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 VIPP01282 170 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 C9P02748 559 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 PECAM1P16284 738 aaPredicted RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 ZNF28P17035 718 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 XRCC1P18887 633 aaPredicted RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 PTPN3P26045 913 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 MAP4P27816 1152 aaKnown RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 OAS2P29728 719 aaKnown RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 CD68P34810 354 aaPredicted RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 CA5AP35218 305 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 ARHGAP25P42331 645 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 SEPHS1P49903 392 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 DRG2P55039 364 aaKnown RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 SH3BP2P78314 561 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 FOXM1Q08050 763 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 KCNAB2Q13303 367 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 TEX44Q53QW1 395 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 ATP1A1-AS1Q5TC04 95 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 LRRTM4Q86VH4 590 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 VSIG1Q86XK7 387 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 PLXDC1Q8IUK5 500 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 TRIM48Q8IWZ4 208 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 KIAA1143Q96AT1 154 aaPredicted RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 C9orf72Q96LT7 481 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 TGM7Q96PF1 710 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 ADNPQ9H2P0 1102 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 EPB41L1Q9H4G0 881 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 NHEJ1Q9H9Q4 299 aaPredicted RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 UCK1Q9HA47 277 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 ABHD10Q9NUJ1 306 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 NFKBIL1Q9UBC1 381 aaPredicted RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 TRIM10Q9UDY6 481 aa11.45□□□□□ -0.58
USP3-220ENST00000561381 TMEM184BQ9Y519 407 aaPredicted RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 MRPS18BQ9Y676 258 aaKnown RBP11.45□□□□□ -0.58
USP3-220ENST00000561381 A0A0A6YYK5 440 aaPredicted RBP11.44□□□□□ -0.58
USP3-220ENST00000561381 GPR89AB7ZAQ6 455 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 CAPN5O15484 640 aaPredicted RBP11.44□□□□□ -0.58
USP3-220ENST00000561381 ARHGAP6O43182 974 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 GPR39O43194 453 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 KIF1CO43896 1103 aaKnown RBP11.44□□□□□ -0.58
USP3-220ENST00000561381 CDK14O94921 469 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 TPM3P06753 285 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 ANKRD34CP0C6C1 535 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 GPR89BP0CG08 455 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 ZFXP17010 805 aaPredicted RBP11.44□□□□□ -0.58
USP3-220ENST00000561381 AMD1P17707 334 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 COMTP21964 271 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 F8A1P23610 371 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 CHRNA4P43681 627 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 CCR10P46092 362 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 TLE1Q04724 770 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms