RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 KHDC1Q4VXA5 237 aaKnown RBP10.52□□□□□ -0.73
SHMT2-213ENST00000554600 LDLRAP1Q5SW96 308 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 GPRC6AQ5T6X5 926 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 NKAIN2Q5VXU1 208 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 ZNF662Q6ZS27 426 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 RAB11FIP2Q7L804 512 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 PIM3Q86V86 326 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 C17orf82Q86X59 251 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-213ENST00000554600 JAMLQ86YT9 394 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 TRIM48Q8IWZ4 208 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 FBXO39Q8N4B4 442 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 CCDC89Q8N998 374 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 OR13C4Q8NGS5 318 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 ZNF398Q8TD17 642 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 BRSK1Q8TDC3 778 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 FGF11Q92914 225 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 AHCYL2Q96HN2 611 aaKnown RBP10.52□□□□□ -0.73
SHMT2-213ENST00000554600 NAF1Q96HR8 494 aaKnown RBP10.52□□□□□ -0.73
SHMT2-213ENST00000554600 FRMD8P1Q9BZ68 369 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-213ENST00000554600 ASB8Q9H765 288 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 PRDM8Q9NQV8 689 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 PIH1D1Q9NWS0 290 aaKnown RBP10.52□□□□□ -0.73
SHMT2-213ENST00000554600 FAM8A1Q9UBU6 413 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 FKBPLQ9UIM3 349 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 TMPRSS11EQ9UL52 423 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 ASH1LQ9NR48 2969 aaKnown RBP10.52□□□□□ -0.73
SHMT2-213ENST00000554600 SDK2Q58EX2 2172 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 CCDC78A2IDD5 438 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 PMS2P1A4D2B8 440 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 OR2AG2A6NM03 316 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 OR5K4A6NMS3 321 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 PLD2O14939 933 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 CHUKO15111 745 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 TNFSF15O95150 251 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 CPNE6O95741 557 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 GAS8O95995 478 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 FGGP02679 453 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 JMJD7P0C870 316 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 HGFP14210 728 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 IDSP22304 550 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 PBLDP30039 288 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-213ENST00000554600 STIP1P31948 543 aaKnown RBP10.51□□□□□ -0.73
SHMT2-213ENST00000554600 CXCR5P32302 372 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 GPR3P46089 330 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 PCBP4P57723 403 aaKnown RBP10.51□□□□□ -0.73
SHMT2-213ENST00000554600 HHEXQ03014 270 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 POU6F1Q14863 301 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 IYDQ6PHW0 289 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 TMEM220Q6QAJ8 160 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 PPP1R21Q6ZMI0 780 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 DET1Q7L5Y6 550 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 GSTA5Q7RTV2 222 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 ZNF438Q7Z4V0 828 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 LINC00523Q86TU6 105 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 SLC9B2Q86UD5 537 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 SFRP1Q8N474 314 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 DNAAF3Q8N9W5 541 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 MAIP1Q8WWC4 291 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 LIN37Q96GY3 246 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-213ENST00000554600 ZNF578Q96N58 590 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-213ENST00000554600 NUDT22Q9BRQ3 303 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 TIMM29Q9BSF4 260 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 THSD1Q9NS62 852 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 AKAP7Q9P0M2 348 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-213ENST00000554600 PISDQ9UG56 409 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 SLC23A2Q9UGH3 650 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 FEZ2Q9UHY8 353 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-213ENST00000554600 CRLS1Q9UJA2 301 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 LHX6Q9UPM6 363 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 SLC30A1Q9Y6M5 507 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 NBEAQ8NFP9 2946 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 FREM2Q5SZK8 3169 aa10.51□□□□□ -0.73
SHMT2-213ENST00000554600 IGHV1OR21-1A0A087WYE8 117 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 KIR2DS5A0A0G2JLQ3 304 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 A0A0G2JNG1 304 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 A0A1W2PNU3 283 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-213ENST00000554600 KIR2DS3K7RE56 304 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 CCL22O00626 93 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 SNRNP200O75643 2136 aaKnown RBP10.5□□□□□ -0.73
SHMT2-213ENST00000554600 SRP72O76094 671 aaKnown RBP10.5□□□□□ -0.73
SHMT2-213ENST00000554600 AP2A1O95782 977 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 VIPP01282 170 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 ETS1P14921 441 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 ITGALP20701 1170 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 MPSTP25325 297 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 RPL10P27635 214 aaKnown RBP10.5□□□□□ -0.73
SHMT2-213ENST00000554600 CCKBRP32239 447 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 FDFT1P37268 417 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 HADHAP40939 763 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 ABCG1P45844 678 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 FASLGP48023 281 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 CTSCP53634 463 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 MAPK10P53779 464 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 DRG2P55039 364 aaKnown RBP10.5□□□□□ -0.73
SHMT2-213ENST00000554600 EIF3IQ13347 325 aaKnown RBP10.5□□□□□ -0.73
SHMT2-213ENST00000554600 KIR2DS5Q14953 304 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 OASLQ15646 514 aaKnown RBP10.5□□□□□ -0.73
SHMT2-213ENST00000554600 LONRF2Q1L5Z9 754 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 COL28A1Q2UY09 1125 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 ZRANB3Q5FWF4 1079 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms