RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 GPR155Q7Z3F1 870 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 TMPRSS9Q7Z410 1059 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 JAMLQ86YT9 394 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 LSM14AQ8ND56 463 aaKnown RBP8.61□□□□□ -1.03
ACTN1-213ENST00000554508 OR10G6Q8NH81 332 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 BLOC1S5Q8TDH9 187 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 ALG3Q92685 438 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 CRELD1Q96HD1 420 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 AHCYL2Q96HN2 611 aaKnown RBP8.61□□□□□ -1.03
ACTN1-213ENST00000554508 TTC25Q96NG3 672 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 FCRL3Q96P31 734 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-213ENST00000554508 ALS2CR12Q96Q35 445 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 UBL7Q96S82 380 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-213ENST00000554508 C19orf43Q9BQ61 176 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 TIMM29Q9BSF4 260 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 ZCCHC2Q9C0B9 1178 aaKnown RBP8.61□□□□□ -1.03
ACTN1-213ENST00000554508 EPB41L1Q9H4G0 881 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 C10orf88Q9H8K7 445 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 RDH14Q9HBH5 336 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 ARFGAP3Q9NP61 516 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 IL26Q9NPH9 171 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 KLC4Q9NSK0 619 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 TBC1D29Q9UFV1 150 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 PISDQ9UG56 409 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 FEZ2Q9UHY8 353 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-213ENST00000554508 PYCARDQ9ULZ3 195 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 KCNK6Q9Y257 313 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 PKP3Q9Y446 797 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 DNMT3AQ9Y6K1 912 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-213ENST00000554508 CAPN6Q9Y6Q1 641 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 GLYATL1P3A0A0U1RQE8 302 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 C5orf60A6NFR6 353 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 F5H423 210 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-213ENST00000554508 DDX3YO15523 660 aaKnown RBP8.6□□□□□ -1.03
ACTN1-213ENST00000554508 DUX1O43812 170 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 SNX2O60749 519 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 EML2O95834 649 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 HGFP14210 728 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 VCLP18206 1134 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 LPOP22079 712 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-213ENST00000554508 IDSP22304 550 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 CSTF2P33240 577 aaKnown RBP eCLIP8.6□□□□□ -1.03
ACTN1-213ENST00000554508 ADRA1AP35348 466 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 MAPK10P53779 464 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 CXADRP78310 365 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 PDE1BQ01064 536 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 C16orf72Q14CZ0 275 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 TAF1AQ15573 450 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-213ENST00000554508 INSCQ1MX18 579 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 SOWAHCQ53LP3 525 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-213ENST00000554508 LDLRAP1Q5SW96 308 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 ZNF648Q5T619 568 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-213ENST00000554508 AGAP9Q5VTM2 703 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 NKAIN2Q5VXU1 208 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 AADACL2Q6P093 401 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 WDR74Q6RFH5 385 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-213ENST00000554508 WASH2PQ6VEQ5 465 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 REXO1L1PQ8IX06 675 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 AGBL5Q8NDL9 886 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 GDAP1Q8TB36 358 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 SNRNP27Q8WVK2 155 aaKnown RBP8.6□□□□□ -1.03
ACTN1-213ENST00000554508 TRIM44Q96DX7 344 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-213ENST00000554508 HES6Q96HZ4 224 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 CCDC74BQ96LY2 380 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 SPATA13Q96N96 652 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 NUDT22Q9BRQ3 303 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 FICDQ9BVA6 458 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 UCK1Q9HA47 277 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 WASH6PQ9NQA3 447 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 PRDM8Q9NQV8 689 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 PDP2Q9P2J9 529 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 CPNE7Q9UBL6 633 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 TMPRSS11EQ9UL52 423 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 PACSIN2Q9UNF0 486 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-213ENST00000554508 SDK2Q58EX2 2172 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 IGSF10Q6WRI0 2623 aa8.6□□□□□ -1.03
ACTN1-213ENST00000554508 KLHL33A6NCF5 533 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 LILRA5A6NI73 299 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 PRR19A6NJB7 356 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 EIF4E1BA6NMX2 242 aaKnown RBP8.59□□□□□ -1.03
ACTN1-213ENST00000554508 USP27XA6NNY8 438 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 TK2O00142 265 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 PSMD3O43242 534 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 KIF5CO60282 957 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 UGT1A9O60656 530 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 MTX2O75431 263 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 CRTAMO95727 393 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 VIPP01282 170 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 THRAP10827 490 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 LIPCP11150 499 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 HOXB3P14651 431 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-213ENST00000554508 UGT1A6P19224 532 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 ITIH1P19827 911 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 UGT1A1P22309 533 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 UGT1A4P22310 534 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 PSMB4P28070 264 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 UGT1A3P35503 534 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 ETV5P41161 510 aa8.59□□□□□ -1.03
ACTN1-213ENST00000554508 PPM1FP49593 454 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-213ENST00000554508 UBE2IP63279 158 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms