RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 DDX47Q9H0S4 455 aaKnown RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 PDFQ9HBH1 243 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 BARX1Q9HBU1 254 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 HEBP1Q9NRV9 189 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 HOMER3Q9NSC5 361 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 DEC1Q9P2X7 70 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 VPS51Q9UID3 782 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 SCOCQ9UIL1 159 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 DUSP12Q9UNI6 340 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 DRG1Q9Y295 367 aaKnown RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 SLC27A6Q9Y2P4 619 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 SPEF1Q9Y4P9 236 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 GPR45Q9Y5Y3 372 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 ACTL7AQ9Y615 435 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 BDP1A6H8Y1 2624 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 ANKRD36A6QL64 1941 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 MUC22E2RYF6 1773 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-212ENST00000554486 A0A1W2PR48 441 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 CTAGE15A4D2H0 777 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 PRRT4C9JH25 899 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 SPECC1L-ADORA2AF8WAN1 911 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 CCDC188H7C350 402 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 K7ERQ8 282 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 K7ESM1 405 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 KCNK1O00180 336 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 MATN2O00339 956 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 MATN3O15232 486 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 KCNN4O15554 427 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 TMEM127O75204 238 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 JCHAINP01591 159 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 ZSCAN5DPP0CG00 497 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 CTAGE8P0CG41 777 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 GLULP15104 373 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 PTPN3P26045 913 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 CHRNA3P32297 505 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 IFI35P80217 286 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-212ENST00000554486 MRPS25P82663 173 aaKnown RBP6.36□□□□□ -1.39
SCFD1-212ENST00000554486 HGFACQ04756 655 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 ZNF33AQ06730 810 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 AP1B1Q10567 949 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 ZBTB17Q13105 803 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 DMC1Q14565 340 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 SPATS1Q496A3 300 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 SLC44A4Q53GD3 710 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 AGBL4Q5VU57 503 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 CCDC137Q6PK04 289 aaKnown RBP6.36□□□□□ -1.39
SCFD1-212ENST00000554486 LINGO4Q6UY18 593 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 CLEC14AQ86T13 490 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 PRUNE1Q86TP1 453 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 CTAGE6Q86UF2 777 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 RALGPS2Q86X27 583 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-212ENST00000554486 CDKL3Q8IVW4 592 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-212ENST00000554486 CTAGE4Q8IX94 777 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 KBTBD2Q8IY47 623 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 CCDC13Q8IYE1 715 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 MMGT1Q8N4V1 131 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 TEX26Q8N6G2 289 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 ALLCQ8N6M5 410 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 CEP112Q8N8E3 955 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 ZNF557Q8N988 423 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-212ENST00000554486 FAM71DQ8N9W8 422 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 TERB1Q8NA31 727 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 GLIS1Q8NBF1 620 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 MNS1Q8NEH6 495 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 WFIKKN2Q8TEU8 576 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 SLCO2A1Q92959 643 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 RTP4Q96DX8 246 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 WDR92Q96MX6 357 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 KRT12Q99456 494 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 IL12RB2Q99665 862 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 C8orf33Q9H7E9 229 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-212ENST00000554486 MKS1Q9NXB0 559 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 ELOVL2Q9NXB9 296 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 KLHL42Q9P2K6 505 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 PCYOX1Q9UHG3 505 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 AMACRQ9UHK6 382 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 TUBD1Q9UJT1 453 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 VPS28Q9UK41 221 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 ZNF148Q9UQR1 794 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 VWA7Q9Y334 891 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 NEU2Q9Y3R4 380 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 PIAS3Q9Y6X2 628 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 TTC28Q96AY4 2481 aa6.36□□□□□ -1.39
SCFD1-212ENST00000554486 CFAP69A5D8W1 941 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 TBC1D3BA6NDS4 549 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 C5orf60A6NFR6 353 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 ZSCAN5CA6NGD5 496 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 K7EQS6 105 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 SGK1O00141 431 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 RNF103O00237 685 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 MUSKO15146 869 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 TTI1O43156 1089 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 MTSS1O43312 755 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 RAD51CO43502 376 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 SMAD6O43541 496 aaKnown RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 KAT7O95251 611 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 LY86O95711 162 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 APODP05090 189 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 HLA-DQB2P05538 268 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms