RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CHRNB2P17787 502 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 GNLYP22749 145 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 LHCGRP22888 699 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 ADCY8P40145 1251 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 ACTR1BP42025 376 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 ACTR1AP61163 376 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 MC1RQ01726 317 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 FMO1Q01740 532 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 MAN2A1Q16706 1144 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-219ENST00000553488 CFAP58Q5T655 872 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 KLHDC7AQ5VTJ3 777 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 CEACAM20Q6UY09 585 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 SLFN11Q7Z7L1 901 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 PHLDB2Q86SQ0 1253 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 ZNF761Q86XN6 746 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-219ENST00000553488 NRSN1Q8IZ57 195 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 CBARPQ8N350 705 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-219ENST00000553488 SFRP1Q8N474 314 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 SLC37A2Q8TED4 501 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 SSC4DQ8WTU2 575 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 PLPPR2Q96GM1 343 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 C11orf70Q9BRQ4 267 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 ZPBPQ9BS86 351 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 FBXO8Q9NRD0 319 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 PHPT1Q9NRX4 125 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-219ENST00000553488 FZD10Q9ULW2 581 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 SEC16AO15027 2179 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 MN1Q10571 1320 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-219ENST00000553488 TCRBV5S1A1TA0A578 114 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 GOLGA6L4A6NEF3 574 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 ENO4A6NNW6 628 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 A8MX80 341 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 HTRA2O43464 458 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-219ENST00000553488 CREB3O43889 395 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 SEMA7AO75326 666 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 HEXIM1O94992 359 aaKnown RBP7.22□□□□□ -1.25
ATXN3-219ENST00000553488 AGFG2O95081 481 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 EML2O95834 649 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 UNGP13051 313 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-219ENST00000553488 UCHL3P15374 230 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 TCN2P20062 427 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 GPD1P21695 349 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 ERCC5P28715 1186 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-219ENST00000553488 RFC1P35251 1148 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-219ENST00000553488 ETV3P41162 512 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 MTIF2P46199 727 aaKnown RBP7.22□□□□□ -1.25
ATXN3-219ENST00000553488 POLD2P49005 469 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 NDST2P52849 883 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 PMS2P54278 862 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 CDR2Q01850 454 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 BCL2L1Q07817 233 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 SEPT6Q14141 434 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 ACOX1Q15067 660 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 WDR74Q6RFH5 385 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-219ENST00000553488 ARHGAP36Q6ZRI8 547 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 HSD11B1LQ7Z5J1 315 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 ZNF677Q86XU0 584 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 ARHGAP12Q8IWW6 846 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 CCDC13Q8IYE1 715 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 ESX1Q8N693 406 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 NPWQ8N729 165 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 SLC30A5Q8TAD4 765 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 CELF6Q96J87 481 aaKnown RBP7.22□□□□□ -1.25
ATXN3-219ENST00000553488 OR2M4Q96R27 311 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 SLC39A8Q9C0K1 460 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 TRIT1Q9H3H1 467 aaKnown RBP7.22□□□□□ -1.25
ATXN3-219ENST00000553488 CATSPERBQ9H7T0 1116 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 PRDM8Q9NQV8 689 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 PCYT1BQ9Y5K3 369 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-219ENST00000553488 RPS6KL1Q9Y6S9 549 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 FER1L5A0AVI2 2057 aa7.22□□□□□ -1.25
ATXN3-219ENST00000553488 SETD2Q9BYW2 2564 aaPredicted RBP7.21□□□□□ -1.25
ATXN3-219ENST00000553488 ITPR3Q14573 2671 aa7.21□□□□□ -1.25
ATXN3-219ENST00000553488 A6NCN8 305 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 NPIPB15A6NHN6 443 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-219ENST00000553488 A8MU76 341 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 MKRN2OSH3BPM6 223 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 PSMD11O00231 422 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 RFPL1O75677 317 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 SORBS2O94875 1100 aaKnown RBP7.21□□□□□ -1.26
ATXN3-219ENST00000553488 ANKRD34CP0C6C1 535 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 KRT3P12035 628 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 ZNF28P17035 718 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 TNFAIP3P21580 790 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 VIPR1P32241 457 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 MAN1A1P33908 653 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 HTR7P34969 479 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 PAPOLAP51003 745 aaKnown RBP7.21□□□□□ -1.26
ATXN3-219ENST00000553488 AIF1P55008 147 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 TPI1P60174 286 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 AP1S1P61966 158 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 DPTQ07507 201 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 NSUN2Q08J23 767 aaKnown RBP eCLIP7.21□□□□□ -1.26
ATXN3-219ENST00000553488 BIRC2Q13490 618 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 PEX6Q13608 980 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 PYCR3Q53H96 274 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 SNAP47Q5SQN1 464 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 FHL5Q5TD97 284 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 RAET1GQ6H3X3 334 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms