RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 SEPT6Q14141 434 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 SLC14A2Q15849 920 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 SEL1L2Q5TEA6 688 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 IYDQ6PHW0 289 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 TMEM220Q6QAJ8 160 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 LRRTM4Q86VH4 590 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 C17orf82Q86X59 251 aaPredicted RBP8.23□□□□□ -1.09
ATXN2-220ENST00000550236 ZNF547Q8IVP9 402 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 LRRC8AQ8IWT6 810 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 SPACA3Q8IXA5 215 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 TXLNBQ8N3L3 684 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 RASGEF1AQ8N9B8 481 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 ZNF398Q8TD17 642 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 NCSTNQ92542 709 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 USP7Q93009 1102 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 CCDC97Q96F63 343 aaPredicted RBP8.23□□□□□ -1.09
ATXN2-220ENST00000550236 CALR3Q96L12 384 aaKnown RBP8.23□□□□□ -1.09
ATXN2-220ENST00000550236 CCDC74BQ96LY2 380 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 ZNF578Q96N58 590 aaPredicted RBP8.23□□□□□ -1.09
ATXN2-220ENST00000550236 TTC25Q96NG3 672 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 TMEM74Q96NL1 305 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 PLEKHG4BQ96PX9 1271 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 TBL1YQ9BQ87 522 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 CARD9Q9H257 536 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 EFR3BQ9Y2G0 817 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 AAR2Q9Y312 384 aaKnown RBP8.23□□□□□ -1.09
ATXN2-220ENST00000550236 PKP3Q9Y446 797 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 LOXL2Q9Y4K0 774 aa8.23□□□□□ -1.09
ATXN2-220ENST00000550236 PKD1L2Q7Z442 2459 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 A0A087WV48 116 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 IGHV1OR21-1A0A087WYE8 117 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 C5orf60A6NFR6 353 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 OR52A4PA6NMU1 304 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 C2orf81A6NN90 581 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 GAPDHSO14556 408 aaPredicted RBP8.22□□□□□ -1.09
ATXN2-220ENST00000550236 KMOO15229 486 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 PRAMEF10O60809 474 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 POP7O75817 140 aaKnown RBP8.22□□□□□ -1.09
ATXN2-220ENST00000550236 CPNE6O95741 557 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 IFNB1P01574 187 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 EPOP01588 193 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 ZSCAN5DPP0CG00 497 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 PNLIPP16233 465 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 LPOP22079 712 aaPredicted RBP8.22□□□□□ -1.09
ATXN2-220ENST00000550236 CXCR5P32302 372 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 CSF2RBP32927 897 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 HMGCLP35914 325 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 LMAN1P49257 510 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 CDKN1CP49918 316 aaPredicted RBP8.22□□□□□ -1.09
ATXN2-220ENST00000550236 CTSCP53634 463 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 DCDC1P59894 354 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 KLF1Q13351 362 aaPredicted RBP8.22□□□□□ -1.09
ATXN2-220ENST00000550236 POU6F1Q14863 301 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 RPS6KA1Q15418 735 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 TAF1AQ15573 450 aaPredicted RBP8.22□□□□□ -1.09
ATXN2-220ENST00000550236 CCDC38Q502W7 563 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 FNBP1LQ5T0N5 605 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 GPRC6AQ5T6X5 926 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 ARHGAP40Q5TG30 622 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 DENND5AQ6IQ26 1287 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 RANBP10Q6VN20 620 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 ZFAND4Q86XD8 727 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 SLITRK4Q8IW52 837 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 TRIM48Q8IWZ4 208 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 LSMEM2Q8N112 164 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 SFRP1Q8N474 314 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 RNF10Q8N5U6 811 aaKnown RBP8.22□□□□□ -1.09
ATXN2-220ENST00000550236 TTC13Q8NBP0 860 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 ZNF248Q8NDW4 579 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 SNIP1Q8TAD8 396 aaKnown RBP8.22□□□□□ -1.09
ATXN2-220ENST00000550236 WDR48Q8TAF3 677 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 KCNE4Q8WWG9 221 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 PMEPA1Q969W9 287 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 SGF29Q96ES7 293 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 SRPK1Q96SB4 655 aaKnown RBP8.22□□□□□ -1.09
ATXN2-220ENST00000550236 TRABDQ9H4I3 376 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 ASB8Q9H765 288 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 RMI1Q9H9A7 625 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 THSD1Q9NS62 852 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 RAD18Q9NS91 495 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 OCIAD1Q9NX40 245 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.22□□□□□ -1.091e-6■■□□□ 11.8
ATXN2-220ENST00000550236 HACD3Q9P035 362 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 ZNF624Q9P2J8 865 aaPredicted RBP8.22□□□□□ -1.09
ATXN2-220ENST00000550236 CPNE7Q9UBL6 633 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 ZNF148Q9UQR1 794 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 WDR37Q9Y2I8 494 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 CFAP20Q9Y6A4 193 aaKnown RBP8.22□□□□□ -1.09
ATXN2-220ENST00000550236 SDK2Q58EX2 2172 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 FREM2Q5SZK8 3169 aa8.22□□□□□ -1.09
ATXN2-220ENST00000550236 ANKRD11Q6UB99 2663 aaPredicted RBP8.21□□□□□ -1.09
ATXN2-220ENST00000550236 CHUKO15111 745 aa8.21□□□□□ -1.1
ATXN2-220ENST00000550236 ARHGAP6O43182 974 aa8.21□□□□□ -1.1
ATXN2-220ENST00000550236 LIASO43766 372 aa8.21□□□□□ -1.1
ATXN2-220ENST00000550236 VEGFDO43915 354 aa8.21□□□□□ -1.1
ATXN2-220ENST00000550236 SRP72O76094 671 aaKnown RBP8.21□□□□□ -1.1
ATXN2-220ENST00000550236 PRAMEF1O95521 474 aa8.21□□□□□ -1.1
ATXN2-220ENST00000550236 VIPP01282 170 aa8.21□□□□□ -1.1
ATXN2-220ENST00000550236 POLBP06746 335 aa8.21□□□□□ -1.1
ATXN2-220ENST00000550236 NUDT7P0C024 238 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms