RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 APOOQ9BUR5 198 aa15.84■□□□□ 0.13
PRPF40A-212ENST00000545856 UGT1A7Q9HAW7 530 aa15.84■□□□□ 0.13
PRPF40A-212ENST00000545856 UGT1A10Q9HAW8 530 aa15.84■□□□□ 0.13
PRPF40A-212ENST00000545856 UGT1A8Q9HAW9 530 aa15.84■□□□□ 0.13
PRPF40A-212ENST00000545856 FBXO6Q9NRD1 293 aaPredicted RBP15.84■□□□□ 0.13
PRPF40A-212ENST00000545856 LATS2Q9NRM7 1088 aa15.84■□□□□ 0.13
PRPF40A-212ENST00000545856 TAS2R13Q9NYV9 303 aa15.84■□□□□ 0.13
PRPF40A-212ENST00000545856 LRP4O75096 1905 aa15.83■□□□□ 0.13
PRPF40A-212ENST00000545856 FAM95CA0A1B0GW59 222 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 UBA6A0AVT1 1052 aaPredicted RBP15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 VPS26AO75436 327 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 HAUS5O94927 633 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 CRABP2P29373 138 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 PRLHRP49683 370 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 SLC12A2P55011 1212 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 TMEM115Q12893 351 aaPredicted RBP15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 TNFAIP8L3Q5GJ75 292 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 AGBL2Q5U5Z8 902 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 ZC3H14Q6PJT7 736 aaKnown RBP15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 GCNT7Q6ZNI0 430 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 EPS8L3Q8TE67 593 aaKnown RBP15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 ALKBH8Q96BT7 664 aaKnown RBP15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 SCARF2Q96GP6 870 aaPredicted RBP15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 SERAC1Q96JX3 654 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 BIRC8Q96P09 236 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 ORAI3Q9BRQ5 295 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 MBNL1Q9NR56 388 aaKnown RBP15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 ZNF446Q9NWS9 450 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 TMPRSS11EQ9UL52 423 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 SLC17A4Q9Y2C5 497 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 VWA7Q9Y334 891 aa15.83■□□□□ 0.12
PRPF40A-212ENST00000545856 GON4LQ3T8J9 2241 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 ZFC3H1O60293 1989 aaKnown RBP15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 TP53BP1Q12888 1972 aaPredicted RBP15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 C17orf113A0A1B0GUU1 675 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 K7ESM1 405 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 CHUKO15111 745 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 RAD51BO15315 384 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 NUAK1O60285 661 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 LILRB5O75023 590 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 CDK14O94921 469 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 STMN1P16949 149 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 MAGEA12P43365 314 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 MAPK9P45984 424 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 CDKN1CP49918 316 aaPredicted RBP15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 THOP1P52888 689 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 ANGPT1Q15389 498 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 ZKSCAN8Q15776 578 aaPredicted RBP15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 TTLL9Q3SXZ7 439 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 HSP90B2PQ58FF3 399 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 TMEM31Q5JXX7 168 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 FAM160A2Q8N612 972 aaPredicted RBP15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 PLA2G15Q8NCC3 412 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 OR2W6PQ8NHA6 318 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 FUBP1Q96AE4 644 aaKnown RBP15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 HSPA12BQ96MM6 686 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 WDR92Q96MX6 357 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 COL25A1Q9BXS0 654 aaPredicted RBP15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 IRF2BPLQ9H1B7 796 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 FAM96AQ9H5X1 160 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 SYTL2Q9HCH5 934 aa15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 SSU72Q9NP77 194 aaKnown RBP15.82■□□□□ 0.12
PRPF40A-212ENST00000545856 HMGB1P1B2RPK0 211 aaPredicted RBP15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 AGPSO00116 658 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 MPOP05164 745 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 SP9P0CG40 484 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 COL6A2P12110 1019 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 GNSP15586 552 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 KRT15P19012 456 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 FDXRP22570 491 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 B4GALNT1Q00973 533 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 DMWDQ09019 674 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 LRP8Q14114 963 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 TAF1BQ53T94 588 aaPredicted RBP15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 PEAR1Q5VY43 1037 aaPredicted RBP15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 LYSMD4Q5XG99 296 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 PTRHD1Q6GMV3 140 aaKnown RBP15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 CNSTQ6PJW8 725 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 TSSK4Q6SA08 328 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 ADGRG6Q86SQ4 1221 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 OXR1Q8N573 874 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 MZB1Q8WU39 189 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 LOXL4Q96JB6 756 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 BMFQ96LC9 184 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 TMBIM4Q9HC24 238 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 C11orf16Q9NQ32 467 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 MKS1Q9NXB0 559 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 CRYL1Q9Y2S2 319 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 PI4KAP42356 2102 aa15.81■□□□□ 0.12
PRPF40A-212ENST00000545856 TLDC2A0PJX2 215 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 TRIM49D1C9J1S8 452 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 E5RI56 91 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 SASH3O75995 380 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 PRSS56P0CW18 603 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 CBSLP0DN79 551 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 ENO3P13929 434 aaPredicted RBP15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 VCLP18206 1134 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 CD38P28907 300 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 CBSP35520 551 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 SLCO1A2P46721 670 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms