RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ARPC2O15144 300 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 CD52P31358 61 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 ICAM3P32942 547 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 SCN1BQ07699 218 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 MYLK3Q32MK0 819 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 C6orf183Q5T699 404 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 ERMP1Q7Z2K6 904 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 C1GALT1C1Q96EU7 318 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 GPR21Q99679 349 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 ARFGEF2Q9Y6D5 1785 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 PPIBP23284 216 aaKnown RBP19.21■□□□□ 0.67
SUDS3-204ENST00000543473 IVDP26440 423 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 GLUD2P49448 558 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 MTPNP58546 118 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 UBAP2Q5T6F2 1119 aaKnown RBP19.21■□□□□ 0.67
SUDS3-204ENST00000543473 TRPV3Q8NET8 790 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 ZNF490Q9ULM2 529 aaPredicted RBP19.21■□□□□ 0.67
SUDS3-204ENST00000543473 KIR3DL1P43629 444 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 ACADVLP49748 655 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 RBM48Q5RL73 367 aaKnown RBP19.21■□□□□ 0.67
SUDS3-204ENST00000543473 NOL9Q5SY16 702 aaKnown RBP19.21■□□□□ 0.67
SUDS3-204ENST00000543473 TTC29Q8NA56 475 aaPredicted RBP19.21■□□□□ 0.67
SUDS3-204ENST00000543473 SIGLEC10Q96LC7 697 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 MARCH7Q9H992 704 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 HTRA2O43464 458 aaPredicted RBP19.2■□□□□ 0.66
SUDS3-204ENST00000543473 DLX3O60479 287 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 ELNP15502 786 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 SLC6A2P23975 617 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 SLC1A2P43004 574 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 UGT2B15P54855 530 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 SMG8Q8ND04 991 aaKnown RBP19.2■□□□□ 0.66
SUDS3-204ENST00000543473 DIRAS2Q96HU8 199 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 LRRC3Q9BY71 257 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 MRPL9Q9BYD2 267 aaKnown RBP19.2■□□□□ 0.66
SUDS3-204ENST00000543473 TMPRSS4Q9NRS4 437 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 MTRRQ9UBK8 725 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 MAFBQ9Y5Q3 323 aaPredicted RBP19.2■□□□□ 0.66
SUDS3-204ENST00000543473 EFCAB9A8MZ26 197 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 IGSF6O95976 241 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 FABP3P05413 133 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 F7P08709 466 aaPredicted RBP19.2■□□□□ 0.66
SUDS3-204ENST00000543473 EPHB3P54753 998 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 THOC7Q6I9Y2 204 aaKnown RBP19.2■□□□□ 0.66
SUDS3-204ENST00000543473 NIPAL1Q6NVV3 410 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 MACC1Q6ZN28 852 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 IZUMO1Q8IYV9 350 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 OR4K2Q8NGD2 314 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 TRIM8Q9BZR9 551 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 FZD10Q9ULW2 581 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 VPS4AQ9UN37 437 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 FGF3P11487 239 aaPredicted RBP19.2■□□□□ 0.66
SUDS3-204ENST00000543473 ABATP80404 500 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 SIX1Q15475 284 aaPredicted RBP19.2■□□□□ 0.66
SUDS3-204ENST00000543473 TSTD2Q5T7W7 516 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 CNSTQ6PJW8 725 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 TCAIMQ8N3R3 496 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 GPR156Q8NFN8 814 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 LRRC58Q96CX6 371 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 GMLQ99445 158 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 TMEM88BA6NKF7 163 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 RSL1D1O76021 490 aaKnown RBP19.2■□□□□ 0.66
SUDS3-204ENST00000543473 OR4F21O95013 312 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 T-ENOLP0DO92 83 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 NUP62P37198 522 aaPredicted RBP19.2■□□□□ 0.66
SUDS3-204ENST00000543473 SMIM11AP58511 58 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 BICRALQ6AI39 1079 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 TMPRSS11AQ6ZMR5 421 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 NCCRP1Q6ZVX7 275 aaPredicted RBP19.2■□□□□ 0.66
SUDS3-204ENST00000543473 ISOC1Q96CN7 298 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 ABCB9Q9NP78 766 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 CMTM6Q9NX76 183 aa19.2■□□□□ 0.66
SUDS3-204ENST00000543473 DUOX1Q9NRD9 1551 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 CLPXO76031 633 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 EPORP19235 508 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 STAT5AP42229 794 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 ACLYP53396 1101 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 C5orf22Q49AR2 442 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 TRIM40Q6P9F5 258 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 ZZZ3Q8IYH5 903 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 ZFP28Q8NHY6 868 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 APOLD1Q96LR9 279 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 BBS4Q96RK4 519 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 KLHL31Q9H511 634 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 GOLGA2P5Q9HBQ8 144 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 RBPJLQ9UBG7 517 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 CASKO14936 926 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 CCNIQ14094 377 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 ERICH5Q6P6B1 374 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 GRPEL2Q8TAA5 225 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 DMRTB1Q96MA1 342 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 FAM124BQ9H5Z6 455 aaPredicted RBP19.19■□□□□ 0.66
SUDS3-204ENST00000543473 IPPKQ9H8X2 491 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 CXCR6O00574 342 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 COL6A1P12109 1028 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 FNDC8Q8TC99 324 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 ANKDD1BA6NHY2 528 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.19■□□□□ 0.66
SUDS3-204ENST00000543473 TFPTP0C1Z6 253 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 KIAA0930Q6ICG6 404 aaPredicted RBP19.19■□□□□ 0.66
SUDS3-204ENST00000543473 C16orf62Q7Z3J2 963 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms