RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 AURKAO14965 403 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 KCNJ13O60928 360 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 APOC2P02655 101 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 VCLP18206 1134 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 MPSTP25325 297 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 PTPN7P35236 360 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 UGT1A3P35503 534 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 SPAM1P38567 509 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 MC2RQ01718 297 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 ADCY2Q08462 1091 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 GTF2H3Q13889 308 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 SLC1A5Q15758 541 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 SIRPB2Q5JXA9 342 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 AGAP9Q5VTM2 703 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 CEACAM20Q6UY09 585 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 B4GALNT4Q76KP1 1039 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 ZC3H18Q86VM9 953 aaKnown RBP15.4■□□□□ 0.06
VPS33A-206ENST00000542310 PLXDC1Q8IUK5 500 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 CCDC50Q8IVM0 306 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 ZNF547Q8IVP9 402 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 ZNF567Q8N184 647 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 TTC30BQ8N4P2 665 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 BRSK1Q8TDC3 778 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 NCSTNQ92542 709 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 NKD1Q969G9 470 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 OXNAD1Q96HP4 312 aaPredicted RBP15.4■□□□□ 0.06
VPS33A-206ENST00000542310 MRGPRX2Q96LB1 330 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 GOLPH3Q9H4A6 298 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 ARFGAP3Q9NP61 516 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 PRDM8Q9NQV8 689 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 SMOXQ9NWM0 555 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 OCIAD1Q9NX40 245 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 UBP1Q9NZI7 540 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 EFR3BQ9Y2G0 817 aa15.4■□□□□ 0.06
VPS33A-206ENST00000542310 B8ZZF3 427 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 TOX3O15405 576 aaPredicted RBP15.39■□□□□ 0.05
VPS33A-206ENST00000542310 ZNF189O75820 626 aaPredicted RBP15.39■□□□□ 0.05
VPS33A-206ENST00000542310 CDK14O94921 469 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 VIPP01282 170 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 C9P02748 559 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 FECHP22830 423 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 CTNNA1P35221 906 aaKnown RBP15.39■□□□□ 0.05
VPS33A-206ENST00000542310 MARCKSL1P49006 195 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 DMPKQ09013 629 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 ITGA9Q13797 1035 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 NOMO1Q15155 1222 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 PLA2G4EQ3MJ16 856 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 LINC00303Q3SY05 128 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 ATP13A5Q4VNC0 1218 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 ZNF648Q5T619 568 aaPredicted RBP15.39■□□□□ 0.05
VPS33A-206ENST00000542310 ABRAXAS1Q6UWZ7 409 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 TMEM26Q6ZUK4 368 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 PID1Q7Z2X4 250 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 GLT6D1Q7Z4J2 308 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 DAAM2Q86T65 1068 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 TRIM48Q8IWZ4 208 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 RTP4Q96DX8 246 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 PANX2Q96RD6 677 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 FERMT1Q9BQL6 677 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 FSD1LQ9BXM9 530 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 GBA3Q9H227 469 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 FBXO8Q9NRD0 319 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 IL17CQ9P0M4 197 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 SLC23A2Q9UGH3 650 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 RSPH14Q9UHP6 348 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 TMPRSS11EQ9UL52 423 aa15.39■□□□□ 0.05
VPS33A-206ENST00000542310 PDZK1P1A8MUH7 402 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 BTNL10A8MVZ5 291 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 CAPN5O15484 640 aaPredicted RBP15.38■□□□□ 0.05
VPS33A-206ENST00000542310 RAD1O60671 282 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 MTX2O75431 263 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 SFTPCP11686 197 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 WT1P19544 449 aaPredicted RBP15.38■□□□□ 0.05
VPS33A-206ENST00000542310 MAPK9P45984 424 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 TMEM115Q12893 351 aaPredicted RBP15.38■□□□□ 0.05
VPS33A-206ENST00000542310 KHDC1Q4VXA5 237 aaKnown RBP15.38■□□□□ 0.05
VPS33A-206ENST00000542310 LDLRAP1Q5SW96 308 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 FAM182AQ5T1J6 154 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 ANKS6Q68DC2 871 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 ITPRIPL1Q6GPH6 555 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 C11orf96Q7Z7L8 435 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 TRAPPC5Q8IUR0 188 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 CACNA2D3Q8IZS8 1091 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 IL22RA1Q8N6P7 574 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 DDHD1Q8NEL9 900 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 IPMKQ8NFU5 416 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 KRT35Q92764 455 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 HAUS1Q96CS2 278 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 TBC1D10AQ9BXI6 508 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 BPIFA1Q9NP55 256 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 IL26Q9NPH9 171 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 SIDT1Q9NXL6 827 aaKnown RBP15.38■□□□□ 0.05
VPS33A-206ENST00000542310 SCHIP1Q9P0W5 487 aaPredicted RBP15.38■□□□□ 0.05
VPS33A-206ENST00000542310 PKP3Q9Y446 797 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 TMEM184BQ9Y519 407 aaPredicted RBP15.38■□□□□ 0.05
VPS33A-206ENST00000542310 PIEZO2Q9H5I5 2752 aa15.38■□□□□ 0.05
VPS33A-206ENST00000542310 GLYATL1P3A0A0U1RQE8 302 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 PJA2O43164 708 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 ANXA9O76027 345 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 UBXN7O94888 489 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms