RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 LAYNQ6UX15 382 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 SNX20Q7Z614 316 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 ZC3HC1Q86WB0 502 aaKnown RBP17.05■□□□□ 0.32
CLN6-202ENST00000538696 HEATR4Q86WZ0 1026 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 ACVR1CQ8NER5 493 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 OR13H1Q8NG92 308 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 ZNF398Q8TD17 642 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 CALML6Q8TD86 181 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 FUBP1Q96AE4 644 aaKnown RBP17.05■□□□□ 0.32
CLN6-202ENST00000538696 APOPT1Q96IL0 206 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 VPS39Q96JC1 886 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 VPS35Q96QK1 796 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 TEX101Q9BY14 249 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 KCNH6Q9H252 994 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 ASB8Q9H765 288 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 WDR26Q9H7D7 661 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 MLXIPLQ9NP71 852 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 FBXO6Q9NRD1 293 aaPredicted RBP17.05■□□□□ 0.32
CLN6-202ENST00000538696 TMEM74BQ9NUR3 256 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 PCMTD2Q9NV79 361 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 SMOXQ9NWM0 555 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 PILRBQ9UKJ0 227 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 SMG5Q9UPR3 1016 aaKnown RBP17.05■□□□□ 0.32
CLN6-202ENST00000538696 OR1A2Q9Y585 309 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 SLC30A1Q9Y6M5 507 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 RALGAPA1Q6GYQ0 2036 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 ADAMTS9Q9P2N4 1935 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 TRBV5-4A0A0C4DH59 114 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 AGAP14A8MT82 685 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 EPN2O95208 641 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 AHSGP02765 367 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 ALDOAP04075 364 aaKnown RBP17.04■□□□□ 0.32
CLN6-202ENST00000538696 CD151P48509 253 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 CDK3Q00526 305 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 CACNG1Q06432 222 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 DNAJC3Q13217 504 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 ITGA9Q13797 1035 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 SEMA3AQ14563 771 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 ZNF789Q5FWF6 425 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 TPRG1LQ5T0D9 272 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 KIAA0408Q6ZU52 694 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 LDB1Q86U70 411 aaPredicted RBP17.04■□□□□ 0.32
CLN6-202ENST00000538696 TRIM74Q86UV6 250 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 OR4L1Q8NH43 312 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 PIGKQ92643 395 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 ATOH1Q92858 354 aaPredicted RBP17.04■□□□□ 0.32
CLN6-202ENST00000538696 GLYATL1Q969I3 302 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 ISL2Q96A47 359 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 ALKBH8Q96BT7 664 aaKnown RBP17.04■□□□□ 0.32
CLN6-202ENST00000538696 SGSM3Q96HU1 749 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 APOOQ9BUR5 198 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 GPR27Q9NS67 375 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 INTS9Q9NV88 658 aaKnown RBP17.04■□□□□ 0.32
CLN6-202ENST00000538696 FAM86C1Q9NVL1 165 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 NKIRAS1Q9NYS0 192 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 MUC6Q6W4X9 2439 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 PCDH15Q96QU1 1955 aa17.04■□□□□ 0.32
CLN6-202ENST00000538696 PIKFYVEQ9Y2I7 2098 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 BCAT2O15382 392 aaPredicted RBP17.03■□□□□ 0.32
CLN6-202ENST00000538696 CD3EAPO15446 510 aaKnown RBP17.03■□□□□ 0.32
CLN6-202ENST00000538696 SHOX2O60902 331 aaPredicted RBP17.03■□□□□ 0.32
CLN6-202ENST00000538696 CD38P28907 300 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 RPA3P35244 121 aaPredicted RBP17.03■□□□□ 0.32
CLN6-202ENST00000538696 MAGEA12P43365 314 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 SERPINB8P50452 374 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 KIAA1024LP59773 190 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 GABPB1Q06547 395 aaPredicted RBP17.03■□□□□ 0.32
CLN6-202ENST00000538696 CNSTQ6PJW8 725 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 Q6ZSR6 202 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 CMC1Q7Z7K0 106 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 CILP2Q8IUL8 1156 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 PIANPQ8IYJ0 282 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 SLC22A18ASQ8N1D0 253 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 GPR150Q8NGU9 434 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 DENND1AQ8TEH3 1009 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 BTN2A2Q8WVV5 523 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 COX14Q96I36 57 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 LOXL4Q96JB6 756 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 GPR22Q99680 433 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 LGR4Q9BXB1 951 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 IRF2BPLQ9H1B7 796 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 C12orf65Q9H3J6 166 aaKnown RBP17.03■□□□□ 0.32
CLN6-202ENST00000538696 SNX15Q9NRS6 342 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 PHPT1Q9NRX4 125 aaPredicted RBP17.03■□□□□ 0.32
CLN6-202ENST00000538696 CATSPERZQ9NTU4 200 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 CRLS1Q9UJA2 301 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 OAS3Q9Y6K5 1087 aaKnown RBP17.03■□□□□ 0.32
CLN6-202ENST00000538696 CACNA1EQ15878 2313 aa17.03■□□□□ 0.32
CLN6-202ENST00000538696 A0A1B0GTW7 788 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 FAM95CA0A1B0GW59 222 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 TOR1BO14657 336 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 HAUS5O94927 633 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 THEGLP0DJG4 465 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 MYCLP1P12525 358 aaPredicted RBP17.02■□□□□ 0.32
CLN6-202ENST00000538696 OGNP20774 298 aaKnown RBP17.02■□□□□ 0.32
CLN6-202ENST00000538696 GMPRP36959 345 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 RABIFP47224 123 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 LEPRP48357 1165 aaKnown RBP17.02■□□□□ 0.32
CLN6-202ENST00000538696 SLC18A1P54219 525 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 WDR4P57081 412 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms