RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 MTG2Q9H4K7 406 aa4.35□□□□□ -1.71
SNHG1-208ENST00000538266 EPHX3Q9H6B9 360 aa4.35□□□□□ -1.71
SNHG1-208ENST00000538266 FBRSL1Q9HCM7 1045 aaKnown RBP4.35□□□□□ -1.71
SNHG1-208ENST00000538266 PCDH12Q9NPG4 1184 aa4.35□□□□□ -1.71
SNHG1-208ENST00000538266 SEPT10Q9P0V9 454 aa4.35□□□□□ -1.71
SNHG1-208ENST00000538266 BCCIPQ9P287 314 aaKnown RBP eCLIP4.35□□□□□ -1.71
SNHG1-208ENST00000538266 UBA2Q9UBT2 640 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-208ENST00000538266 ZNF212Q9UDV6 495 aa4.35□□□□□ -1.71
SNHG1-208ENST00000538266 IPO11Q9UI26 975 aaKnown RBP4.35□□□□□ -1.71
SNHG1-208ENST00000538266 VPS51Q9UID3 782 aa4.35□□□□□ -1.71
SNHG1-208ENST00000538266 INTS6Q9UL03 887 aaKnown RBP4.35□□□□□ -1.71
SNHG1-208ENST00000538266 ERVW-1Q9UQF0 538 aa4.35□□□□□ -1.71
SNHG1-208ENST00000538266 HS3ST2Q9Y278 367 aa4.35□□□□□ -1.71
SNHG1-208ENST00000538266 MTF2Q9Y483 593 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-208ENST00000538266 MFHAS1Q9Y4C4 1052 aa4.35□□□□□ -1.71
SNHG1-208ENST00000538266 OR51B4Q9Y5P0 310 aa4.35□□□□□ -1.71
SNHG1-208ENST00000538266 SAR1BQ9Y6B6 198 aa4.35□□□□□ -1.71
SNHG1-208ENST00000538266 STON1Q9Y6Q2 735 aa4.35□□□□□ -1.71
SNHG1-208ENST00000538266 ATXN2Q99700 1313 aaKnown RBP4.35□□□□□ -1.71
SNHG1-208ENST00000538266 REV3LO60673 3130 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 A0A0A6YYJ9 748 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 TCRBV21S2A2A0A5A6 115 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 GOLGA6CA6NDK9 693 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 GOLGA6BA6NDN3 693 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 SHISA7A6NL88 538 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 A6NNZ2 444 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 GOLGA8KD6RF30 607 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 H7C0C1 242 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 SGK1O00141 431 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 KCNK1O00180 336 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 PGRMC1O00264 195 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 LAMTOR5O43504 91 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ALDH1A2O94788 518 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 TMCC1O94876 653 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 PCDH8O95206 1070 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 IGSF6O95976 241 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 FGGP02679 453 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ATP1A1P05023 1023 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 CLEC2LP0C7M8 214 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 GOLGA6DP0CG33 693 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 HLA-EP13747 358 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 CCNB1P14635 433 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 PECAM1P16284 738 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 PRKCHP24723 683 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 HSPA9P38646 679 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 IL12RB1P42701 662 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 WASP42768 502 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 MMP13P45452 471 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ATP5OP48047 213 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 CXCL12P48061 93 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 RENBPP51606 427 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 CCR3P51677 355 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 SCAND1P57086 179 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 EIF3EP60228 445 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 RHOAP61586 193 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 SNRPD1P62314 119 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ARF5P84085 180 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 OTUD4Q01804 1114 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 GBE1Q04446 702 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 RAD51Q06609 339 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ZNF33AQ06730 810 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 IL10RBQ08334 325 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 PPIDQ08752 370 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ITKQ08881 620 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 AP1B1Q10567 949 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 MTAPQ13126 283 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 XRCC4Q13426 336 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ELAVL3Q14576 367 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 RFTN1Q14699 578 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 DLG2Q15700 870 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 TAZQ16635 292 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 HNRNPA1L2Q32P51 320 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 TUBB8Q3ZCM7 444 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 DNAJC21Q5F1R6 531 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 CT83Q5H943 113 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ZMAT1Q5H9K5 638 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 CFAP58Q5T655 872 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 LCE3BQ5TA77 95 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 EMC10Q5UCC4 262 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 MARC1Q5VT66 337 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 PAPD7Q5XG87 772 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 AFMIDQ63HM1 303 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ICE2Q659A1 982 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 C22orf39Q6P5X5 142 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 DARS2Q6PI48 645 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 NPNTQ6UXI9 565 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ARHGEF18Q6ZSZ5 1173 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 TTLL10Q6ZVT0 673 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 SYT13Q7L8C5 426 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 BMP8AQ7Z5Y6 402 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 CXorf67Q86X51 503 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 SPATS2Q86XZ4 545 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 CDKL3Q8IVW4 592 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ARHGAP12Q8IWW6 846 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 CMIPQ8IY22 773 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 CCDC13Q8IYE1 715 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 BCL6BQ8N143 479 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 SH2D3CQ8N5H7 860 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 PCDH20Q8N6Y1 951 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ZNF366Q8N895 744 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms