RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 FAM129CQ86XR2 697 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 CCDC110Q8TBZ0 833 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 JPH3Q8WXH2 748 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-225ENST00000533704 NCSTNQ92542 709 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 ALG3Q92685 438 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 SH3KBP1Q96B97 665 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 TTC25Q96NG3 672 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 PLEKHG4BQ96PX9 1271 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 TBC1D10AQ9BXI6 508 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 GBA3Q9H227 469 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 SARS2Q9NP81 518 aaKnown RBP10.3□□□□□ -0.76
CAPN1-225ENST00000533704 FOXJ2Q9P0K8 574 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 CPNE7Q9UBL6 633 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 SLC23A2Q9UGH3 650 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 PACSIN2Q9UNF0 486 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-225ENST00000533704 PKP3Q9Y446 797 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 BAHCC1Q9P281 2608 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 KIR2DS5A0A0G2JLQ3 304 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 A0A0G2JNG1 304 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 GLYATL1P3A0A0U1RQE8 302 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 GOLGA6L9A6NEM1 432 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 OR5K4A6NMS3 321 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 GOLGA6L6A8MZA4 724 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 C9orf172C9J069 976 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 KIR2DS3K7RE56 304 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 HGSO14964 777 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-225ENST00000533704 NVLO15381 856 aaKnown RBP10.29□□□□□ -0.76
CAPN1-225ENST00000533704 VEGFDO43915 354 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 UGT1A9O60656 530 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 VIPP01282 170 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 EPOP01588 193 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 THRAP10827 490 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 PYGMP11217 842 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 UGT1A6P19224 532 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 UGT1A1P22309 533 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 UGT1A4P22310 534 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 RPL10P27635 214 aaKnown RBP10.29□□□□□ -0.76
CAPN1-225ENST00000533704 PBLDP30039 288 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-225ENST00000533704 AKT1P31749 480 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 UGT1A3P35503 534 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 CFHR1Q03591 330 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 SRSF6Q13247 344 aaKnown RBP10.29□□□□□ -0.76
CAPN1-225ENST00000533704 KIR2DS5Q14953 304 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 CLPPQ16740 277 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-225ENST00000533704 ANKRD20A2Q5SQ80 823 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 MANEAQ5SRI9 462 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-225ENST00000533704 ANKRD20A1Q5TYW2 823 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 ANKRD20A3Q5VUR7 823 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 KIAA1614Q5VZ46 1190 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 ZDHHC20Q5W0Z9 365 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 TMEM71Q6P5X7 295 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 VASH2Q86V25 355 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 TXLNBQ8N3L3 684 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 UBL4BQ8N7F7 174 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 LRRC57Q8N9N7 239 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 AGBL5Q8NDL9 886 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 OR4D9Q8NGE8 314 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 SLC39A7Q92504 469 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 ART4Q93070 314 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 PMEPA1Q969W9 287 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 VPS35Q96QK1 796 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 CCNL2Q96S94 520 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-225ENST00000533704 TIMM29Q9BSF4 260 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 UGT1A7Q9HAW7 530 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 UGT1A10Q9HAW8 530 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 UGT1A8Q9HAW9 530 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 IL26Q9NPH9 171 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 IL17CQ9P0M4 197 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 SCHIP1Q9P0W5 487 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-225ENST00000533704 TMPRSS11EQ9UL52 423 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 ADGRG1Q9Y653 693 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 ARL5AQ9Y689 179 aa10.29□□□□□ -0.76
CAPN1-225ENST00000533704 MGAQ8IWI9 3026 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 A6NCN8 305 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 EFCAB7A8K855 629 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 GPR89AB7ZAQ6 455 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 CHUKO15111 745 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 ATXN7O15265 892 aaPredicted RBP10.28□□□□□ -0.76
CAPN1-225ENST00000533704 GPR89BP0CG08 455 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 LIPCP11150 499 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 FGF3P11487 239 aaPredicted RBP10.28□□□□□ -0.76
CAPN1-225ENST00000533704 TYRP1P17643 537 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 VCLP18206 1134 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 IDSP22304 550 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 PTPN7P35236 360 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 DEKP35659 375 aaKnown RBP10.28□□□□□ -0.76
CAPN1-225ENST00000533704 DRG2P55039 364 aaKnown RBP10.28□□□□□ -0.76
CAPN1-225ENST00000533704 TMEM115Q12893 351 aaPredicted RBP10.28□□□□□ -0.76
CAPN1-225ENST00000533704 TRA2AQ13595 282 aaKnown RBP eCLIP10.28□□□□□ -0.76
CAPN1-225ENST00000533704 SPARCL1Q14515 664 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 ARHGEF18Q6ZSZ5 1173 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 DET1Q7L5Y6 550 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 TMEM139Q8IV31 216 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 ZNF547Q8IVP9 402 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 SYCE1Q8N0S2 351 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 TAB3Q8N5C8 712 aaPredicted RBP10.28□□□□□ -0.76
CAPN1-225ENST00000533704 CCDC112Q8NEF3 446 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 OR4K2Q8NGD2 314 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 BRSK1Q8TDC3 778 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms