RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 INSIG1O15503 277 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 LIASO43766 372 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 CEP104O60308 925 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 SYNCRIPO60506 623 aaKnown RBP8.81□□□□□ -1
CCDC90B-217ENST00000530253 CDC14BO60729 498 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 FGGP02679 453 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 HLA-DQB2P05538 268 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 SP9P0CG40 484 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 RBP3P10745 1247 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 PRLRP16471 622 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 PTPN3P26045 913 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 RBL1P28749 1068 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 GKP32189 559 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 NBL1P41271 181 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 MMP13P45452 471 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 CSNK1DP48730 415 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 PXNP49023 591 aaPredicted RBP8.81□□□□□ -1
CCDC90B-217ENST00000530253 METAP1P53582 386 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 RPS14P62263 151 aaKnown RBP8.81□□□□□ -1
CCDC90B-217ENST00000530253 DPTQ07507 201 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 DBPQ10586 325 aaPredicted RBP8.81□□□□□ -1
CCDC90B-217ENST00000530253 STARD3Q14849 445 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 OASLQ15646 514 aaKnown RBP8.81□□□□□ -1
CCDC90B-217ENST00000530253 ACCSLQ4AC99 568 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 CARD16Q5EG05 197 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 SDE2Q6IQ49 451 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 ANO7Q6IWH7 933 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 TIGD7Q6NT04 549 aaPredicted RBP8.81□□□□□ -1
CCDC90B-217ENST00000530253 PRELID2Q8N945 189 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 OR6K2Q8NGY2 324 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 ACTRT1Q8TDG2 376 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 NKD2Q969F2 451 aaPredicted RBP8.81□□□□□ -1
CCDC90B-217ENST00000530253 MS4A14Q96JA4 679 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 GDAP1L1Q96MZ0 367 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 C10orf88Q9H8K7 445 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 CD93Q9NPY3 652 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 SARDHQ9UL12 918 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 SLC8A2Q9UPR5 921 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 ATP8A1Q9Y2Q0 1164 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 FANCMQ8IYD8 2048 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 NUP205Q92621 2012 aa8.81□□□□□ -1
CCDC90B-217ENST00000530253 MYO18AQ92614 2054 aaKnown RBP8.81□□□□□ -1
CCDC90B-217ENST00000530253 CCDC163A0A0D9SF12 145 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 ESYT3A0FGR9 886 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 CTAGE9A4FU28 777 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 PGRMC1O00264 195 aaKnown RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 IGSF6O95976 241 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 JCHAINP01591 159 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 IGLV3-19P01714 112 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 CCNB1P14635 433 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 TCP1P17987 556 aaKnown RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 CHRNA3P32297 505 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 DRD3P35462 400 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 HSPA9P38646 679 aaKnown RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 EIF3EP60228 445 aaKnown RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 MAXP61244 160 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 CSTF1Q05048 431 aaKnown RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 ZBTB16Q05516 673 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 NSUN2Q08J23 767 aaKnown RBP eCLIP8.8□□□□□ -1
CCDC90B-217ENST00000530253 NIPAL4Q0D2K0 466 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 AP1B1Q10567 949 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 ZNF235Q14590 738 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 CST6Q15828 149 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 RNF151Q2KHN1 245 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 MYLK3Q32MK0 819 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 ZNF528Q3MIS6 628 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 CCDC181Q5TID7 509 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 MARC1Q5VT66 337 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 ZNF776Q68DI1 518 aaPredicted RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 NCEH1Q6PIU2 408 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 SYT10Q6XYQ8 523 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 BZW1Q7L1Q6 419 aaKnown RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 WDR5BQ86VZ2 330 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 ZSCAN30Q86W11 494 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 CACUL1Q86Y37 369 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 CDKL3Q8IVW4 592 aaPredicted RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 AADATQ8N5Z0 425 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 CCNYQ8ND76 341 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 ARRDC2Q8TBH0 407 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 TFB1MQ8WVM0 346 aaKnown RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 HMGB4Q8WW32 186 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 HTR3CQ8WXA8 447 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 OR8D1Q8WZ84 308 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 EXTL1Q92935 676 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 ARRDC3Q96B67 414 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 TADA1Q96BN2 335 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 RTP4Q96DX8 246 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 C16orf45Q96MC5 204 aaPredicted RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 NUDCD1Q96RS6 583 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 CINPQ9BW66 212 aaPredicted RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 TPSD1Q9BZJ3 242 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 USP29Q9HBJ7 922 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 NT5MQ9NPB1 228 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 RBM22Q9NW64 420 aaKnown RBP eCLIP8.8□□□□□ -1
CCDC90B-217ENST00000530253 USP36Q9P275 1121 aaKnown RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 HECAQ9UBI9 543 aaPredicted RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 SERGEFQ9UGK8 458 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 AMACRQ9UHK6 382 aa8.8□□□□□ -1
CCDC90B-217ENST00000530253 EVLQ9UI08 416 aaPredicted RBP8.8□□□□□ -1
CCDC90B-217ENST00000530253 DNPEPQ9ULA0 475 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 341.2 ms