RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 GCAP28676 217 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 CD38P28907 300 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 TNFRSF8P28908 595 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 SLC1A2P43004 574 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 RACK1P63244 317 aaKnown RBP6.41□□□□□ -1.38
CD44-214ENST00000525211 CCDC15Q0P6D6 951 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 SFSWAPQ12872 951 aaKnown RBP6.41□□□□□ -1.38
CD44-214ENST00000525211 GRIK2Q13002 908 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 NFATC4Q14934 902 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 PLA2G4EQ3MJ16 856 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 ZNF658BQ4V348 819 aaPredicted RBP6.41□□□□□ -1.38
CD44-214ENST00000525211 HSP90AA5PQ58FG0 334 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 DNAJC21Q5F1R6 531 aaKnown RBP6.41□□□□□ -1.38
CD44-214ENST00000525211 CTSL3PQ5NE16 218 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 RBM20Q5T481 1227 aaKnown RBP6.41□□□□□ -1.38
CD44-214ENST00000525211 KIAA0930Q6ICG6 404 aaPredicted RBP6.41□□□□□ -1.38
CD44-214ENST00000525211 NEPROQ6NW34 567 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 CRTC3Q6UUV7 619 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 FAM83HQ6ZRV2 1179 aaPredicted RBP6.41□□□□□ -1.38
CD44-214ENST00000525211 TAS2R42Q7RTR8 314 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 KANSL1Q7Z3B3 1105 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 C11orf96Q7Z7L8 435 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 NLRP8Q86W28 1048 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 NRROSQ86YC3 692 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 SYT12Q8IV01 421 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 IFT20Q8IY31 132 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 PDIK1LQ8N165 341 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 NDUFAF2Q8N183 169 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 KRT222Q8N1A0 295 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 NXPE1Q8N323 547 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 MFSD2AQ8NA29 543 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.41□□□□□ -1.38
CD44-214ENST00000525211 BBOF1Q8ND07 529 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 DENND6BQ8NEG7 585 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 OR6P1Q8NGX9 317 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 OR4L1Q8NH43 312 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 OR2W6PQ8NHA6 318 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 FBF1Q8TES7 1133 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 AENQ8WTP8 325 aaKnown RBP6.41□□□□□ -1.38
CD44-214ENST00000525211 FAM136AQ96C01 138 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 SGF29Q96ES7 293 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 KLHDC7BQ96G42 594 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 HIC2Q96JB3 615 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 PLEKHG4BQ96PX9 1271 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 FMO2Q99518 471 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 MCMBPQ9BTE3 642 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 C20orf96Q9NUD7 363 aaPredicted RBP6.41□□□□□ -1.38
CD44-214ENST00000525211 ZC3H7BQ9UGR2 993 aaKnown RBP6.41□□□□□ -1.38
CD44-214ENST00000525211 RAB21Q9UL25 225 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 RIMKLBQ9ULI2 386 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 SUFUQ9UMX1 484 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 DMTF1Q9Y222 760 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 MED16Q9Y2X0 877 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 PKP3Q9Y446 797 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 TDRD6O60522 2096 aaKnown RBP6.41□□□□□ -1.38
CD44-214ENST00000525211 CABIN1Q9Y6J0 2220 aa6.41□□□□□ -1.38
CD44-214ENST00000525211 LRP4O75096 1905 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 ARID1BQ8NFD5 2236 aaPredicted RBP6.4□□□□□ -1.38
CD44-214ENST00000525211 SPTY2D1-AS1A0A0U1RR47 76 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 A0A1B0GTW7 788 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 TCRBV9S1A1TA0A576 114 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 LNP1A1A4G5 178 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 HMX2A2RU54 273 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 RGSL1A5PLK6 1076 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 PRR19A6NJB7 356 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 FAM159BA6NKW6 160 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 OR2AG2A6NM03 316 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 EIF3HO15372 352 aaKnown RBP eCLIP6.4□□□□□ -1.38
CD44-214ENST00000525211 CD3EAPO15446 510 aaKnown RBP6.4□□□□□ -1.38
CD44-214ENST00000525211 CTIFO43310 598 aaKnown RBP6.4□□□□□ -1.38
CD44-214ENST00000525211 SLC25A14O95258 325 aaPredicted RBP6.4□□□□□ -1.38
CD44-214ENST00000525211 ACSL3O95573 720 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 AHSGP02765 367 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 CFIP05156 583 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 TSHRP16473 764 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 ENGP17813 658 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 ACRV1P26436 265 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 TEAD1P28347 426 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 PBLDP30039 288 aaPredicted RBP6.4□□□□□ -1.38
CD44-214ENST00000525211 TNNT3P45378 269 aaPredicted RBP6.4□□□□□ -1.38
CD44-214ENST00000525211 KIAA1024LP59773 190 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 SRP54P61011 504 aaKnown RBP6.4□□□□□ -1.38
CD44-214ENST00000525211 PRAMEP78395 509 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 SARNPP82979 210 aaKnown RBP6.4□□□□□ -1.38
CD44-214ENST00000525211 CACNG1Q06432 222 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 TMEM115Q12893 351 aaPredicted RBP6.4□□□□□ -1.38
CD44-214ENST00000525211 CUL1Q13616 776 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 STAT4Q14765 748 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 LONRF1Q17RB8 773 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 SKIDA1Q1XH10 827 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 TYSND1Q2T9J0 566 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 PYCR3Q53H96 274 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 TRIM61Q5EBN2 209 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 SPANXN3Q5MJ09 141 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 WDR45BQ5MNZ6 344 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 LAIR1Q6GTX8 287 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 WDR93Q6P2C0 686 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 AFTPHQ6ULP2 937 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 C3orf62Q6ZUJ4 267 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 RD3Q7Z3Z2 195 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms