RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	TSTD2	Q5T7W7	516 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	RNF187	Q5TA31	235 aa	Predicted RBP	7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	DENND5A	Q6IQ26	1287 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	SLC30A9	Q6PML9	568 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	CEP128	Q6ZU80	1094 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	CHST15	Q7LFX5	561 aa	Predicted RBP	7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	SLC9B2	Q86UD5	537 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	HOOK3	Q86VS8	718 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	AMZ2	Q86W34	360 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	TMPRSS12	Q86WS5	348 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	CREG2	Q8IUH2	290 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	TRIM48	Q8IWZ4	208 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	RBM12B	Q8IXT5	1001 aa	Known RBP	7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	LMNTD2	Q8IXW0	634 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	RBFA	Q8N0V3	343 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	DDHD1	Q8NEL9	900 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	MAPK15	Q8TD08	544 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	ZDHHC1	Q8WTX9	485 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	GRAMD1A	Q96CP6	724 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	CDKN2AIPNL	Q96HQ2	116 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	DNAJC1	Q96KC8	554 aa	Known RBP	7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	APOLD1	Q96LR9	279 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	CAMK1G	Q96NX5	476 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	SMIM14	Q96QK8	99 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	DPYSL5	Q9BPU6	564 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	LGR4	Q9BXB1	951 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	DDX47	Q9H0S4	455 aa	Known RBP	7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	TMEM168	Q9H0V1	697 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	OSGEPL1	Q9H4B0	414 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	MRM3	Q9HC36	420 aa	Known RBP	7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	MED4	Q9NPJ6	270 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	UCKL1	Q9NWZ5	548 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	AKAP7	Q9P0M2	348 aa	Predicted RBP	7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	TAAR2	Q9P1P5	351 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	FKBPL	Q9UIM3	349 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	BTBD3	Q9Y2F9	522 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	TCAF1	Q9Y4C2	921 aa		7.38	□□□□□ -1.23
NR1I3-231	ENST00000512340	TP53BP1	Q12888	1972 aa	Predicted RBP	7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	TMEM131	Q92545	1883 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340		A0A0U1RQS6	177 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	EME2	A4GXA9	379 aa	Predicted RBP	7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	PDZK1P1	A8MUH7	402 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	EFCAB8	A8MWE9	144 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	FADS2P1	A8MWK0	482 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340		B4DGG1	531 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	TRIM38	O00635	465 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	DNALI1	O14645	258 aa	Predicted RBP	7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	CHUK	O15111	745 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	KPNA5	O15131	536 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	LDB2	O43679	373 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	NUDT21	O43809	227 aa	Known RBP	7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	UGT1A9	O60656	530 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	SNX2	O60749	519 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	NDUFS3	O75489	264 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	TCEA3	O75764	348 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	TTC4	O95801	387 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	SOD1	P00441	154 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	POLB	P06746	335 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	OR56A5	P0C7T3	313 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	ATP1B2	P14415	290 aa	Predicted RBP	7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	JUP	P14923	745 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	PNLIP	P16233	465 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	GLB1	P16278	677 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	ZNF8	P17098	575 aa	Predicted RBP	7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	UGT1A6	P19224	532 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	UGT1A1	P22309	533 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	UGT1A4	P22310	534 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	NDUFS1	P28331	727 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	UGT1A3	P35503	534 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	UGT1A5	P35504	534 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	NSG1	P42857	185 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	GPR3	P46089	330 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	ARL4C	P56559	192 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	CAV1	Q03135	178 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	THOC5	Q13769	683 aa	Known RBP	7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	KRT33B	Q14525	404 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	TMED2	Q15363	201 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	PROX2	Q3B8N5	592 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	C14orf28	Q4W4Y0	310 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	CERCAM	Q5T4B2	595 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	GPRC6A	Q5T6X5	926 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	IZUMO3	Q5VZ72	239 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	TTC27	Q6P3X3	843 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	CRTC3	Q6UUV7	619 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	RFLNA	Q6ZTI6	216 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	EFL1	Q7Z2Z2	1120 aa	Known RBP	7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	KANSL1	Q7Z3B3	1105 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	ADGRG6	Q86SQ4	1221 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	TRIM74	Q86UV6	250 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	LRRC6	Q86X45	466 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	NXPE1	Q8N323	547 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	KDF1	Q8NAX2	398 aa	Predicted RBP	7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	OR4L1	Q8NH43	312 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	IFI44	Q8TCB0	444 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	ADAMTS14	Q8WXS8	1223 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	EID2B	Q96D98	161 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	LRRC39	Q96DD0	335 aa		7.37	□□□□□ -1.23
NR1I3-231	ENST00000512340	CXorf40B	Q96DE9	158 aa		7.37	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms