RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 A6NNZ2 444 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 TK2O00142 265 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 RAD51BO15315 384 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 RNASEH1O60930 286 aaKnown RBP10.27□□□□□ -0.77
TPM3-217ENST00000504663 MTX2O75431 263 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 FGF3P11487 239 aaPredicted RBP10.27□□□□□ -0.77
TPM3-217ENST00000504663 CD1DP15813 335 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 TAC1P20366 129 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 SAT1P21673 171 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 TEAD1P28347 426 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 SLC26A3P40879 764 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 KCNC1P48547 511 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 CTSCP53634 463 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 PDK4Q16654 411 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 TUSC1Q2TAM9 212 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 ZNF284Q2VY69 593 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 SDE2Q6IQ49 451 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 LRRC8EQ6NSJ5 796 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 CGB2Q6NT52 195 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 PAQR3Q6TCH7 311 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 KYAT3Q6YP21 454 aaKnown RBP10.27□□□□□ -0.77
TPM3-217ENST00000504663 TRIM67Q6ZTA4 783 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 LCA5Q86VQ0 697 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 SIX5Q8N196 739 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 FSTL5Q8N475 847 aaPredicted RBP10.27□□□□□ -0.77
TPM3-217ENST00000504663 SIDT2Q8NBJ9 832 aaKnown RBP10.27□□□□□ -0.77
TPM3-217ENST00000504663 CXorf40AQ8TE69 158 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.27□□□□□ -0.77
TPM3-217ENST00000504663 FAM136AQ96C01 138 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 SIPA1Q96FS4 1042 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 TSPAN17Q96FV3 270 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 COPS8Q99627 209 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 UNKQ9C0B0 810 aaKnown RBP10.27□□□□□ -0.77
TPM3-217ENST00000504663 MBNL1Q9NR56 388 aaKnown RBP10.27□□□□□ -0.77
TPM3-217ENST00000504663 LATS2Q9NRM7 1088 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 XPR1Q9UBH6 696 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 GULP1Q9UBP9 304 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 DCDC2Q9UHG0 476 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 MUTYHQ9UIF7 546 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 VPS9D1Q9Y2B5 631 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 ACOT9Q9Y305 439 aa10.27□□□□□ -0.77
TPM3-217ENST00000504663 ZBTB14O43829 449 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 RNGTTO60942 597 aaKnown RBP10.26□□□□□ -0.77
TPM3-217ENST00000504663 RHOBTB1O94844 696 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 DNTTP04053 509 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 BPGMP07738 259 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 ZNF7P17097 686 aaPredicted RBP10.26□□□□□ -0.77
TPM3-217ENST00000504663 DRD4P21917 467 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 ACSL1P33121 698 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 IGFALSP35858 605 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 NSG1P42857 185 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 CCT5P48643 541 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 TPMTP51580 245 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 SEC24CP53992 1094 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 LRRC32Q14392 662 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 CSHL1Q14406 222 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 IRF4Q15306 451 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 OR4D1Q15615 310 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 TAF1BQ53T94 588 aaPredicted RBP10.26□□□□□ -0.77
TPM3-217ENST00000504663 CWF19L1Q69YN2 538 aaKnown RBP10.26□□□□□ -0.77
TPM3-217ENST00000504663 KIAA1161Q6NSJ0 714 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 ADAMTSL4Q6UY14 1074 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 RAPH1Q70E73 1250 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 ADGRG6Q86SQ4 1221 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 ISCA2Q86U28 154 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 TRIM74Q86UV6 250 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 HORMAD1Q86X24 394 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 UBALD2Q8IYN6 164 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 RASGEF1AQ8N9B8 481 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 MAGEB18Q96M61 343 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 ATOH8Q96SQ7 321 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 TMEM121BQ9BXQ6 578 aaPredicted RBP10.26□□□□□ -0.77
TPM3-217ENST00000504663 OSBPL6Q9BZF3 934 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 CLPBQ9H078 707 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 TBC1D17Q9HA65 648 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 EBF2Q9HAK2 575 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 GPAMQ9HCL2 828 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 PREBQ9HCU5 417 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 ITM2CQ9NQX7 267 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 NKIRAS1Q9NYS0 192 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 DLGAP2Q9P1A6 1054 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 COPG2Q9UBF2 871 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 GNPTGQ9UJJ9 305 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 CDYLQ9Y232 598 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 DHRS7Q9Y394 339 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 VCANP13611 3396 aa10.26□□□□□ -0.77
TPM3-217ENST00000504663 TECTAO75443 2155 aa10.25□□□□□ -0.77
TPM3-217ENST00000504663 A0A1W2PQU0 124 aa10.25□□□□□ -0.77
TPM3-217ENST00000504663 TMEM202A6NGA9 273 aa10.25□□□□□ -0.77
TPM3-217ENST00000504663 INPP4BO15327 924 aa10.25□□□□□ -0.77
TPM3-217ENST00000504663 LZTS3O60299 673 aaPredicted RBP10.25□□□□□ -0.77
TPM3-217ENST00000504663 TM7SF2O76062 418 aa10.25□□□□□ -0.77
TPM3-217ENST00000504663 LTA4HP09960 611 aaKnown RBP10.25□□□□□ -0.77
TPM3-217ENST00000504663 CCDC166P0CW27 439 aa10.25□□□□□ -0.77
TPM3-217ENST00000504663 MTHFD2P13995 350 aa10.25□□□□□ -0.77
TPM3-217ENST00000504663 BGNP21810 368 aa10.25□□□□□ -0.77
TPM3-217ENST00000504663 ALDH3A1P30838 453 aa10.25□□□□□ -0.77
TPM3-217ENST00000504663 CCR7P32248 378 aa10.25□□□□□ -0.77
TPM3-217ENST00000504663 TRIM23P36406 574 aa10.25□□□□□ -0.77
TPM3-217ENST00000504663 GLRBP48167 497 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms