RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 RGMBQ6NW40 437 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 LBX2Q6XYB7 198 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 FRA10AC1Q70Z53 315 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 AHSA2Q719I0 299 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 DET1Q7L5Y6 550 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 GPRIN1Q7Z2K8 1008 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ARMC8Q8IUR7 673 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 AQP12AQ8IXF9 295 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ZNF540Q8NDQ6 660 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 CHDHQ8NE62 594 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 APPL2Q8NEU8 664 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 FAR1Q8WVX9 515 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ZNF486Q96H40 463 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 FZD8Q9H461 694 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 WDCPQ9H6R7 721 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 MAGEE1Q9HCI5 957 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ENTPD7Q9NQZ7 604 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 FAM118AQ9NWS6 357 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ANKMY1Q9P2S6 941 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 SUN2Q9UH99 717 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 PGAP2Q9UHJ9 254 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 SLC12A8A0AV02 714 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ZNF701M0R085 212 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 DPYSL4O14531 572 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 CLASP2O75122 1294 aaKnown RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 KCNK2O95069 426 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 CHRM5P08912 532 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 PFKLP17858 780 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 HMGB2P26583 209 aaKnown RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 SNX16P57768 344 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 RAPSNQ13702 412 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 TAB1Q15750 504 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 NPTX1Q15818 432 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 BCL2A1Q16548 175 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ATP6AP1LQ52LC2 224 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 GCNT7Q6ZNI0 430 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 PRR23CQ6ZRP0 262 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ARMCX2Q7L311 632 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 STRADAQ7RTN6 431 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 SPRED1Q7Z699 444 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 TMEM179BQ7Z7N9 219 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 APOBEC3FQ8IUX4 373 aaKnown RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 CLYBLQ8N0X4 340 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 BLOC1S5Q8TDH9 187 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 DNAJB3Q8WWF6 145 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 FKBP10Q96AY3 582 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ZHX1-C8orf76Q96EF9 292 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ZFP42Q96MM3 310 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 SMIM14Q96QK8 99 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 CDK5RAP1Q96SZ6 601 aaKnown RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 HGH1Q9BTY7 390 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ASPSCR1Q9BZE9 553 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 RGS18Q9NS28 235 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ERVK13-1Q9NX77 482 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 GALPQ9UBC7 116 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ZMYM5Q9UJ78 669 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 FBXO10Q9UK96 956 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 VWA7Q9Y334 891 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 OAS3Q9Y6K5 1087 aaKnown RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 SMIM30A4D0T7 59 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 C16orf96A6NNT2 1141 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 ZNF99A8MXY4 864 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 PRKD3O94806 890 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 ANGPTL1O95841 491 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 B3GALT4O96024 378 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 LBPP18428 481 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 PROZP22891 400 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 CD40LGP29965 261 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 ACADSBP45954 432 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 LEPRP48357 1165 aaKnown RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 POLD2P49005 469 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 NPY2RP49146 381 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 ALDH7A1P49419 539 aaKnown RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 OAZ1P54368 228 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 NKG7Q16617 165 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 UGP2Q16851 508 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 DGUOKQ16854 277 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 LRIT3Q3SXY7 679 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 GTDC1Q4AE62 458 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 CCDC58Q4VC31 144 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 PCID2Q5JVF3 399 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 ZNF678Q5SXM1 525 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 OTUD1Q5VV17 481 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 SULT1C3Q6IMI6 304 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 LYPD8Q6UX82 237 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 Q6ZPB1 254 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 TBC1D21Q8IYX1 336 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 OR8H2Q8N162 312 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 FAM162AQ96A26 154 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 MTFMTQ96DP5 389 aaKnown RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 TEKT5Q96M29 485 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 KCNS3Q9BQ31 491 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 ZFP14Q9HCL3 533 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 NT5MQ9NPB1 228 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 CD320Q9NPF0 282 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 EIF2B3Q9NR50 452 aaKnown RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 INTS10Q9NVR2 710 aaKnown RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 KLHL3Q9UH77 587 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 ADGRE2Q9UHX3 823 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms