RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 TRIM10Q9UDY6 481 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 KLHL3Q9UH77 587 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 PCDHGA4Q9Y5G9 962 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 PCDHGA3Q9Y5H0 932 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 EPN1Q9Y6I3 576 aaPredicted RBP16.02■□□□□ 0.16
SCLT1-204ENST00000503215 DUX1O43812 170 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 CDK14O94921 469 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 AGTP01019 485 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 RPL10P27635 214 aaKnown RBP16.01■□□□□ 0.15
SCLT1-204ENST00000503215 RBL1P28749 1068 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 HMGCLP35914 325 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 SLC19A1P41440 591 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 CLCNKAP51800 687 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 SLC1A5Q15758 541 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 TMEM164Q5U3C3 297 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 WDR74Q6RFH5 385 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-204ENST00000503215 RAD9BQ6WBX8 426 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 C11orf96Q7Z7L8 435 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 PHYKPLQ8IUZ5 450 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 EXTL1Q92935 676 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 NKD1Q969G9 470 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 RNF31Q96EP0 1072 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 SGF29Q96ES7 293 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 LACRTQ9GZZ8 138 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 RAD18Q9NS91 495 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 IL17CQ9P0M4 197 aa16.01■□□□□ 0.15
SCLT1-204ENST00000503215 KIR2DS5A0A0G2JLQ3 304 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 A0A0G2JNG1 304 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16■□□□□ 0.15
SCLT1-204ENST00000503215 H7C0C1 242 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 KIR2DS3K7RE56 304 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 GAPDHSO14556 408 aaPredicted RBP16■□□□□ 0.15
SCLT1-204ENST00000503215 KMOO15229 486 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 MTSS1O43312 755 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 NDUFA10O95299 355 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 EPOP01588 193 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 PLA2G2AP14555 144 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 TYRP1P17643 537 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 FECHP22830 423 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 ATP5OP48047 213 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 DRG2P55039 364 aaKnown RBP16■□□□□ 0.15
SCLT1-204ENST00000503215 GFERP55789 205 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 KIR2DS5Q14953 304 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 PPP2R5EQ16537 467 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 INSCQ1MX18 579 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 PDPK2PQ6A1A2 396 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 FAM151BQ6UXP7 276 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 MICALCLQ6ZW33 695 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 LRRTM4Q86VH4 590 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 BLOC1S5Q8TDH9 187 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 NAT14Q8WUY8 206 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 DPYSL5Q9BPU6 564 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 B3GNT4Q9C0J1 378 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 APMAPQ9HDC9 416 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 RSPH14Q9UHP6 348 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 WDR37Q9Y2I8 494 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 PCDHB11Q9Y5F2 797 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 A0A0U1RQJ8 604 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 OR52A4PA6NMU1 304 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 PDZK1P1A8MUH7 402 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 B4E171 279 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 VEGFDO43915 354 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 XRCC1P18887 633 aaPredicted RBP16■□□□□ 0.15
SCLT1-204ENST00000503215 CD82P27701 267 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 CTNNA1P35221 906 aaKnown RBP16■□□□□ 0.15
SCLT1-204ENST00000503215 CYLC1P35663 651 aaPredicted RBP16■□□□□ 0.15
SCLT1-204ENST00000503215 TSPAN7P41732 249 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 CTSCP53634 463 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 TMEM115Q12893 351 aaPredicted RBP16■□□□□ 0.15
SCLT1-204ENST00000503215 CLCA4Q14CN2 919 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 TMEM26Q6ZUK4 368 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 GAS2L3Q86XJ1 694 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 RASGEF1AQ8N9B8 481 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 ACRBPQ8NEB7 543 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 GDAP1Q8TB36 358 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 ACTL9Q8TC94 416 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 ALG3Q92685 438 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 SH3KBP1Q96B97 665 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 RBM41Q96IZ5 413 aaKnown RBP16■□□□□ 0.15
SCLT1-204ENST00000503215 VPS35Q96QK1 796 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 PANX2Q96RD6 677 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 APOL2Q9BQE5 337 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 FICDQ9BVA6 458 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 DDA1Q9BW61 102 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 SPRY4Q9C004 299 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 KCTD3Q9Y597 815 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 PCDHA3Q9Y5H8 950 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 ARL5AQ9Y689 179 aa16■□□□□ 0.15
SCLT1-204ENST00000503215 OR5K4A6NMS3 321 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 HACD1B0YJ81 288 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 GPR89AB7ZAQ6 455 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 STMND1H3BQB6 276 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 APOC4-APOC2K7ER74 178 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 APOC2P02655 101 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 GPR89BP0CG08 455 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 EPHA4P54764 986 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 MC2RQ01718 297 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 OTUD4Q01804 1114 aaKnown RBP15.99■□□□□ 0.15
SCLT1-204ENST00000503215 MPP3Q13368 585 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 ABRAXAS1Q6UWZ7 409 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms