RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 UGT1A6P19224 532 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 HLA-DPA1P20036 260 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 UGT1A1P22309 533 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 UGT1A4P22310 534 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 PTPN7P35236 360 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 UGT1A3P35503 534 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 VAV2P52735 878 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 UBE2IP63279 158 aaKnown RBP17.74■□□□□ 0.43
HMGN1-219ENST00000491183 TMEM115Q12893 351 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-219ENST00000491183 PTPRCAPQ14761 206 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 CHRNA6Q15825 494 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 INSCQ1MX18 579 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 CCDC181Q5TID7 509 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 WDR74Q6RFH5 385 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-219ENST00000491183 C11orf96Q7Z7L8 435 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 TMEM139Q8IV31 216 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 LRRC57Q8N9N7 239 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 AGBL5Q8NDL9 886 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 DTX3LQ8TDB6 740 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 BLOC1S5Q8TDH9 187 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 ALG3Q92685 438 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 WBP1Q96G27 269 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 TAAR9Q96RI9 348 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 FAM118BQ9BPY3 351 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 TBC1D10AQ9BXI6 508 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 GBA3Q9H227 469 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 OSGEPL1Q9H4B0 414 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 UGT1A7Q9HAW7 530 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 UGT1A10Q9HAW8 530 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 UGT1A8Q9HAW9 530 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 HACD3Q9P035 362 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 ZNF624Q9P2J8 865 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-219ENST00000491183 PCDHGA3Q9Y5H0 932 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 SDK2Q58EX2 2172 aa17.74■□□□□ 0.43
HMGN1-219ENST00000491183 CCDC66A2RUB6 948 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 A8MU76 341 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-219ENST00000491183 GPR39O43194 453 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 DUX1O43812 170 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 IPO7O95373 1038 aaKnown RBP17.73■□□□□ 0.43
HMGN1-219ENST00000491183 BRAFP15056 766 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 XRCC1P18887 633 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-219ENST00000491183 CSTF2P33240 577 aaKnown RBP eCLIP17.73■□□□□ 0.43
HMGN1-219ENST00000491183 SPAM1P38567 509 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 SLC19A1P41440 591 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 PPM1FP49593 454 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-219ENST00000491183 RWDD2BP57060 319 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 EIF3EP60228 445 aaKnown RBP17.73■□□□□ 0.43
HMGN1-219ENST00000491183 TAF1BQ53T94 588 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-219ENST00000491183 SNAP47Q5SQN1 464 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 TMEM164Q5U3C3 297 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 ABRAXAS1Q6UWZ7 409 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 RANBP10Q6VN20 620 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 GLT6D1Q7Z4J2 308 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 ARHGAP22Q7Z5H3 698 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 NCSTNQ92542 709 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 ART4Q93070 314 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 TIMM29Q9BSF4 260 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-219ENST00000491183 STN1Q9H668 368 aaKnown RBP17.73■□□□□ 0.43
HMGN1-219ENST00000491183 DNAJC16Q9Y2G8 782 aa17.73■□□□□ 0.43
HMGN1-219ENST00000491183 FASNP49327 2511 aaKnown RBP17.72■□□□□ 0.43
HMGN1-219ENST00000491183 A0A0U1RQJ8 604 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 GAPDHSO14556 408 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-219ENST00000491183 RBP3P10745 1247 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 WT1P19544 449 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-219ENST00000491183 CD82P27701 267 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 ADRA1AP35348 466 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 TNNT3P45378 269 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-219ENST00000491183 EPHA4P54764 986 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 GEMP55040 296 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 OLIG2Q13516 323 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 ANKRD20A2Q5SQ80 823 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 ANKRD20A1Q5TYW2 823 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 ANKRD20A3Q5VUR7 823 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 ZDHHC20Q5W0Z9 365 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 FAM151BQ6UXP7 276 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 VASH2Q86V25 355 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 BMPERQ8N8U9 685 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 GDAP1Q8TB36 358 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 BRSK1Q8TDC3 778 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 BAG1Q99933 345 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-219ENST00000491183 FICDQ9BVA6 458 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.72■□□□□ 0.43
HMGN1-219ENST00000491183 OGFRQ9NZT2 677 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 TRIM10Q9UDY6 481 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 B3GALT1Q9Y5Z6 326 aa17.72■□□□□ 0.43
HMGN1-219ENST00000491183 ATMQ13315 3056 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 GLYATL1P3A0A0U1RQE8 302 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 MACROD2A1Z1Q3 448 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 LILRA5A6NI73 299 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 EFCAB7A8K855 629 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 KCNN4O15554 427 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 ANXA9O76027 345 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 RPL10P27635 214 aaKnown RBP17.71■□□□□ 0.43
HMGN1-219ENST00000491183 MAPK9P45984 424 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 C19orf57Q0VDD7 668 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 MSLNQ13421 630 aaPredicted RBP17.71■□□□□ 0.43
HMGN1-219ENST00000491183 SEPT7Q16181 437 aaKnown RBP17.71■□□□□ 0.43
HMGN1-219ENST00000491183 ITPRIPL1Q6GPH6 555 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms