RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 N4BP2L1Q5TBK1 243 aaPredicted RBP10.93□□□□□ -0.66
CPSF7-212ENST00000489728 ANKRD22Q5VYY1 191 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 RAB44Q7Z6P3 723 aaPredicted RBP10.93□□□□□ -0.66
CPSF7-212ENST00000489728 CAND1Q86VP6 1230 aaKnown RBP10.93□□□□□ -0.66
CPSF7-212ENST00000489728 TRAPPC5Q8IUR0 188 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 SLC35F3Q8IY50 421 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 CACTIN-AS1Q8N1I8 211 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 BBOF1Q8ND07 529 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 DCUN1D1Q96GG9 259 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 SNF8Q96H20 258 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 LINC00615Q96LM1 132 aaPredicted RBP10.93□□□□□ -0.66
CPSF7-212ENST00000489728 SERPINB12Q96P63 405 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 KRT12Q99456 494 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 NAT9Q9BTE0 207 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 DPEP2Q9H4A9 486 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 VPS37BQ9H9H4 285 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 UGT1A7Q9HAW7 530 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 UGT1A10Q9HAW8 530 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 UGT1A8Q9HAW9 530 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 ZDHHC3Q9NYG2 299 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 U3KQA8 63 aa10.93□□□□□ -0.66
CPSF7-212ENST00000489728 KIR2DS5A0A0G2JLQ3 304 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 A0A0G2JNG1 304 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 FAM237BA0A1B0GVD1 139 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 A6NCN8 305 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 OR5K4A6NMS3 321 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 KIR2DS3K7RE56 304 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 TTI1O43156 1089 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 ZW10O43264 779 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 NUDT21O43809 227 aaKnown RBP10.92□□□□□ -0.66
CPSF7-212ENST00000489728 NOBOXO60393 691 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 ACP5P13686 325 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 GLB1P16278 677 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 MGAT1P26572 445 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 PMLP29590 882 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 FOXN2P32314 431 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 PRLHRP49683 370 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 ARSDP51689 593 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 TMPRSS15P98073 1019 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 SHC2P98077 582 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 CBLBQ13191 982 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 HLTFQ14527 1009 aaKnown RBP eCLIP10.92□□□□□ -0.66
CPSF7-212ENST00000489728 KIR2DS5Q14953 304 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 INSCQ1MX18 579 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 DNAJC21Q5F1R6 531 aaKnown RBP10.92□□□□□ -0.66
CPSF7-212ENST00000489728 ZRANB3Q5FWF4 1079 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 AGAP9Q5VTM2 703 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 IZUMO3Q5VZ72 239 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 KIAA0930Q6ICG6 404 aaPredicted RBP10.92□□□□□ -0.66
CPSF7-212ENST00000489728 SLC30A9Q6PML9 568 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 WASH2PQ6VEQ5 465 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 CHST15Q7LFX5 561 aaPredicted RBP10.92□□□□□ -0.66
CPSF7-212ENST00000489728 ZNF438Q7Z4V0 828 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 C11orf96Q7Z7L8 435 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 SERPINA9Q86WD7 417 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 CCNJLQ8IV13 435 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 ZNF547Q8IVP9 402 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 GALNT15Q8N3T1 639 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 RASGEF1AQ8N9B8 481 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 KYQ8NBH2 561 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 MNS1Q8NEH6 495 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 OR4L1Q8NH43 312 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 CCL4L1Q8NHW4 92 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 KIF18AQ8NI77 898 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 ZDHHC1Q8WTX9 485 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 HDAC10Q969S8 669 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 LRRC39Q96DD0 335 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 WASH6PQ9NQA3 447 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 CHRAC1Q9NRG0 131 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 SYBUQ9NX95 663 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 PADI4Q9UM07 663 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 ST14Q9Y5Y6 855 aa10.92□□□□□ -0.66
CPSF7-212ENST00000489728 ZFC3H1O60293 1989 aaKnown RBP10.92□□□□□ -0.66
CPSF7-212ENST00000489728 C17orf113A0A1B0GUU1 675 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 CCDC162PA2VCL2 907 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 FAM221BA6H8Z2 402 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 EFCAB8A8MWE9 144 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 PFDN6O15212 129 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 GPR39O43194 453 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 MTX2O75431 263 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 URI1O94763 535 aaPredicted RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 SEC31AO94979 1220 aaKnown RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 GOT2P00505 430 aaKnown RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 F3P13726 295 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 ATP1B2P14415 290 aaPredicted RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 KCNA4P22459 653 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 AK4P27144 223 aaPredicted RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 NSG1P42857 185 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 GPR3P46089 330 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 FASLGP48023 281 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 TTPAP49638 278 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 B4GALNT1Q00973 533 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 DNAJC3Q13217 504 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 NR1D2Q14995 579 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 SMAD1Q15797 465 aaKnown RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 CLPPQ16740 277 aaPredicted RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 FASTKD1Q53R41 847 aaKnown RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 RNF187Q5TA31 235 aaPredicted RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 HIBCHQ6NVY1 386 aaPredicted RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 CRTC3Q6UUV7 619 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms