RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 PATE3B3GLJ2 98 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 GPR89AB7ZAQ6 455 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 GAPDHSO14556 408 aaPredicted RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 SPAG6O75602 509 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 RASGRP1O95267 797 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 CER1O95813 267 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 GPR89BP0CG08 455 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 CTSEP14091 401 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 ZNF7P17097 686 aaPredicted RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 ACRV1P26436 265 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 FOXN2P32314 431 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 PHBP35232 272 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 CTSKP43235 329 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 ARCN1P48444 511 aaKnown RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 POLD2P49005 469 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 CDKN1CP49918 316 aaPredicted RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 TMEM115Q12893 351 aaPredicted RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 GRIK2Q13002 908 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 FZD2Q14332 565 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 FASTKD3Q14CZ7 662 aaKnown RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 CSRP2Q16527 193 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 HLA-BQ31612 363 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 GPRC6AQ5T6X5 926 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 CCNI2Q6ZMN8 369 aaPredicted RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 CAPN12Q6ZSI9 719 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 MARK2Q7KZI7 788 aaKnown RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 ADGRG6Q86SQ4 1221 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 KCNMB4Q86W47 210 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 SPATS2Q86XZ4 545 aaKnown RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 CCDC116Q8IYX3 515 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 SLC22A18ASQ8N1D0 253 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 NXPE1Q8N323 547 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 DDHD1Q8NEL9 900 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 GSDMBQ8TAX9 411 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 CDKL2Q92772 493 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 TSACCQ96A04 125 aaPredicted RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 ZNF514Q96K75 400 aaPredicted RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 C9orf72Q96LT7 481 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 TCF12Q99081 682 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 ELF4Q99607 663 aaPredicted RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 TRIM56Q9BRZ2 755 aaKnown RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 FAM167BQ9BTA0 163 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 OR2AG1Q9H205 316 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 SMOC1Q9H4F8 434 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 ANKZF1Q9H8Y5 726 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 VPS37BQ9H9H4 285 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 CAPN10Q9HC96 672 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 CYP4F12Q9HCS2 524 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 SEMA4GQ9NTN9 838 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 VPS18Q9P253 973 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 ZNHIT2Q9UHR6 403 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.18□□□□□ -0.78
SKA1-204ENST00000488454 WDFY4Q6ZS81 3184 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 EML5Q05BV3 1969 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 SDK1Q7Z5N4 2213 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 TRBV5-4A0A0C4DH59 114 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 PRSS38A1L453 326 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 AGAP14A8MT82 685 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 GOLGA8KD6RF30 607 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 GOLGA8TH3BQL2 631 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 YKT6O15498 198 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 GPR39O43194 453 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 GRID2O43424 1007 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 MTX2O75431 263 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 CSF2P04141 144 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 CEACAM5P06731 702 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 IVLP07476 585 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 ERVK-10P10266 1014 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 ATP1B2P14415 290 aaPredicted RBP10.17□□□□□ -0.78
SKA1-204ENST00000488454 ZNF8P17098 575 aaPredicted RBP10.17□□□□□ -0.78
SKA1-204ENST00000488454 ENGP17813 658 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 TNFRSF8P28908 595 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 SSTR1P30872 391 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 NSG1P42857 185 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 GNPDA1P46926 289 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 HK3P52790 923 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 HNRNPKP61978 463 aaKnown RBP eCLIP10.17□□□□□ -0.78
SKA1-204ENST00000488454 MGAT5Q09328 741 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 EIF2B5Q13144 721 aaKnown RBP10.17□□□□□ -0.78
SKA1-204ENST00000488454 FRG1Q14331 258 aaKnown RBP10.17□□□□□ -0.78
SKA1-204ENST00000488454 ITIH4Q14624 930 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 SMAD1Q15797 465 aaKnown RBP10.17□□□□□ -0.78
SKA1-204ENST00000488454 DBN1Q16643 649 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 ALG11Q2TAA5 492 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 AASDHQ4L235 1098 aaPredicted RBP10.17□□□□□ -0.78
SKA1-204ENST00000488454 HSP90AA5PQ58FG0 334 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 ZNF542PQ5EBM4 170 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 PRAMEF14Q5SWL7 426 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 ZNF648Q5T619 568 aaPredicted RBP10.17□□□□□ -0.78
SKA1-204ENST00000488454 RNF187Q5TA31 235 aaPredicted RBP10.17□□□□□ -0.78
SKA1-204ENST00000488454 STEAP4Q687X5 459 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 PSAPL1Q6NUJ1 521 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 WDR93Q6P2C0 686 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 TMEM220Q6QAJ8 160 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 GALNT13Q8IUC8 556 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 RELL1Q8IUW5 271 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 PIANPQ8IYJ0 282 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 RBFAQ8N0V3 343 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 GPR150Q8NGU9 434 aa10.17□□□□□ -0.78
SKA1-204ENST00000488454 SCG3Q8WXD2 468 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms