RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ZDHHC18Q9NUE0 388 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 CNOT8Q9UFF9 292 aaKnown RBP3.78□□□□□ -1.8
SMC4-219ENST00000487747 KCNJ14Q9UNX9 436 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 CAMK2AQ9UQM7 478 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 STK36Q9NRP7 1315 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 PCNX3Q9H6A9 2034 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 H7C423 109 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 TCERG1O14776 1098 aaKnown RBP3.77□□□□□ -1.81
SMC4-219ENST00000487747 CLIC2O15247 247 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 NADKO95544 446 aaPredicted RBP3.77□□□□□ -1.81
SMC4-219ENST00000487747 LIPFP07098 398 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 DPEP1P16444 411 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 GNAZP19086 355 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 AZU1P20160 251 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 CTCFP49711 727 aaPredicted RBP3.77□□□□□ -1.81
SMC4-219ENST00000487747 CSRP3P50461 194 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 BAK1Q16611 211 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 NAA35Q5VZE5 725 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 SPINK14Q6IE38 97 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 CYP26C1Q6V0L0 522 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 RASGEF1CQ8N431 466 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 DNAAF4Q8WXU2 420 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 HERPUD2Q9BSE4 406 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 CABLES2Q9BTV7 478 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 PIGMQ9H3S5 423 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 PELI2Q9HAT8 420 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 APOBEC3GQ9HC16 384 aaKnown RBP3.77□□□□□ -1.81
SMC4-219ENST00000487747 SLC38A7Q9NVC3 462 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 STK39Q9UEW8 545 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 NAALADL1Q9UQQ1 740 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 CLIC4Q9Y696 253 aa3.77□□□□□ -1.81
SMC4-219ENST00000487747 TTC36A6NLP5 189 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 H0YIN7 160 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 F9P00740 461 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 ABCD3P28288 659 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 MRPS5P82675 430 aaKnown RBP3.76□□□□□ -1.81
SMC4-219ENST00000487747 OLIG2Q13516 323 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 TUBB2AQ13885 445 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 ADAMTSL4-AS1Q5T5F5 129 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 TSSK4Q6SA08 328 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 PACS1Q6VY07 963 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 ANKRD52Q8NB46 1076 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 OR1J2Q8NGS2 313 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 TUBB2BQ9BVA1 445 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 BARHL2Q9NY43 387 aa3.76□□□□□ -1.81
SMC4-219ENST00000487747 ANKRD66B4E2M5 251 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 ATP2A1O14983 1001 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 TGFB1I1O43294 461 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 ZFAND5O76080 213 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 TPOP07202 933 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 ICAM3P32942 547 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 PAFAH1B1P43034 410 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 TRPC3Q13507 836 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 DCTN2Q13561 401 aaKnown RBP3.75□□□□□ -1.81
SMC4-219ENST00000487747 ZNF239Q16600 458 aaKnown RBP3.75□□□□□ -1.81
SMC4-219ENST00000487747 SDCCAG8Q86SQ7 713 aaPredicted RBP3.75□□□□□ -1.81
SMC4-219ENST00000487747 OR2T6Q8NHC8 308 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 HM13Q8TCT9 377 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 FAM222BQ8WU58 562 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 HTRA1Q92743 480 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 GCC1Q96CN9 775 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 MOCOSQ96EN8 888 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 MMABQ96EY8 250 aaPredicted RBP3.75□□□□□ -1.81
SMC4-219ENST00000487747 C18orf12Q96KH6 178 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 HARBI1Q96MB7 349 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 TMEM68Q96MH6 324 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 NR1H4Q96RI1 486 aaPredicted RBP3.75□□□□□ -1.81
SMC4-219ENST00000487747 PRKRIP1Q9H875 184 aaPredicted RBP3.75□□□□□ -1.81
SMC4-219ENST00000487747 ZNF71Q9NQZ8 489 aaPredicted RBP3.75□□□□□ -1.81
SMC4-219ENST00000487747 ASIC3Q9UHC3 531 aa3.75□□□□□ -1.81
SMC4-219ENST00000487747 TDRD15B5MCY1 1934 aaKnown RBP3.75□□□□□ -1.81
SMC4-219ENST00000487747 TEX13DA0A0J9YY54 714 aaPredicted RBP3.74□□□□□ -1.81
SMC4-219ENST00000487747 MEIOCA2RUB1 952 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 EIF4E1BA6NMX2 242 aaKnown RBP3.74□□□□□ -1.81
SMC4-219ENST00000487747 PLPP2O43688 288 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 JRKO75564 520 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 NGFP01138 241 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 ICAM1P05362 532 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 F2RL1P55085 397 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 DUOXA1Q1HG43 343 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 ZNF805Q5CZA5 627 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 SH2D6Q7Z4S9 175 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 PM20D2Q8IYS1 436 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 CNTROBQ8N137 903 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 ANKRD42Q8N9B4 389 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 RDM1Q8NG50 284 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 IWS1Q96ST2 819 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 SYT11Q9BT88 431 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 SCPEP1Q9HB40 452 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 B3GALT5Q9Y2C3 310 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 CYP46A1Q9Y6A2 500 aa3.74□□□□□ -1.81
SMC4-219ENST00000487747 KDM3AQ9Y4C1 1321 aa3.73□□□□□ -1.81
SMC4-219ENST00000487747 LIFP15018 202 aa3.73□□□□□ -1.81
SMC4-219ENST00000487747 TUBP50607 506 aa3.73□□□□□ -1.81
SMC4-219ENST00000487747 MMP15P51511 669 aa3.73□□□□□ -1.81
SMC4-219ENST00000487747 CD81P60033 236 aa3.73□□□□□ -1.81
SMC4-219ENST00000487747 VAMP2P63027 116 aa3.73□□□□□ -1.81
SMC4-219ENST00000487747 PDE1CQ14123 709 aaPredicted RBP3.73□□□□□ -1.81
SMC4-219ENST00000487747 PNLIPRP3Q17RR3 467 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms