RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TRIM10Q9UDY6 481 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 hCG_1818297A0A087WSY0 165 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 PDZK1P1A8MUH7 402 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 GPR89AB7ZAQ6 455 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 J3QKU1 62 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 ZRANB2O95218 330 aaKnown RBP eCLIP24.18■■□□□ 1.46
LIME1-206ENST00000487026 GPR89BP0CG08 455 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 LIFP15018 202 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 XRCC1P18887 633 aaPredicted RBP24.18■■□□□ 1.46
LIME1-206ENST00000487026 RPL10P27635 214 aaKnown RBP24.18■■□□□ 1.46
LIME1-206ENST00000487026 HADHBP55084 474 aaKnown RBP24.18■■□□□ 1.46
LIME1-206ENST00000487026 MC2RQ01718 297 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 PID1Q7Z2X4 250 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 CCDC50Q8IVM0 306 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 KATNAL2Q8IYT4 538 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 RCOR2Q8IZ40 523 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 TTC30BQ8N4P2 665 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 GDAP1Q8TB36 358 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 RTP4Q96DX8 246 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 MRGPRX2Q96LB1 330 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 SRPK1Q96SB4 655 aaKnown RBP24.18■■□□□ 1.46
LIME1-206ENST00000487026 HEMGNQ9BXL5 484 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 C10orf88Q9H8K7 445 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 OGFRQ9NZT2 677 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 PCDHA13Q9Y5I0 950 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 SLC30A1Q9Y6M5 507 aa24.18■■□□□ 1.46
LIME1-206ENST00000487026 BUD23O43709 281 aaKnown RBP24.17■■□□□ 1.46
LIME1-206ENST00000487026 VEGFDO43915 354 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 RAD1O60671 282 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 VIPP01282 170 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 TYRP1P17643 537 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 HMGCLP35914 325 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 DRG2P55039 364 aaKnown RBP24.17■■□□□ 1.46
LIME1-206ENST00000487026 GFERP55789 205 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 RAB15P59190 212 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 TMEM115Q12893 351 aaPredicted RBP24.17■■□□□ 1.46
LIME1-206ENST00000487026 NFATC3Q12968 1075 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 TMEM26Q6ZUK4 368 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 TRIM48Q8IWZ4 208 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 KRT35Q92764 455 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 RNF31Q96EP0 1072 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 SLC12A9Q9BXP2 914 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 IL26Q9NPH9 171 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 PILRAQ9UKJ1 303 aa24.17■■□□□ 1.46
LIME1-206ENST00000487026 BOD1L1Q8NFC6 3051 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 LILRA5A6NI73 299 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 PRR19A6NJB7 356 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 UGT1A9O60656 530 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 LCA5LO95447 670 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 BRAFP15056 766 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 UGT1A6P19224 532 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 UGT1A1P22309 533 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 UGT1A4P22310 534 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 CA5AP35218 305 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 AVL9Q8NBF6 648 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 IPMKQ8NFU5 416 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 BLOC1S5Q8TDH9 187 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 VPS35Q96QK1 796 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 FCRL5Q96RD9 977 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 TIMM29Q9BSF4 260 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 SPRY4Q9C004 299 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 UGT1A7Q9HAW7 530 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 UGT1A10Q9HAW8 530 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 UGT1A8Q9HAW9 530 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 FBXO8Q9NRD0 319 aa24.16■■□□□ 1.46
LIME1-206ENST00000487026 OR52A4PA6NMU1 304 aa24.15■■□□□ 1.46
LIME1-206ENST00000487026 GPR39O43194 453 aa24.15■■□□□ 1.46
LIME1-206ENST00000487026 MTSS1O43312 755 aa24.15■■□□□ 1.46
LIME1-206ENST00000487026 CLCA4Q14CN2 919 aa24.15■■□□□ 1.46
LIME1-206ENST00000487026 CHRNA6Q15825 494 aa24.15■■□□□ 1.46
LIME1-206ENST00000487026 C11orf96Q7Z7L8 435 aa24.15■■□□□ 1.46
LIME1-206ENST00000487026 PLXDC1Q8IUK5 500 aa24.15■■□□□ 1.46
LIME1-206ENST00000487026 TRAPPC5Q8IUR0 188 aa24.15■■□□□ 1.46
LIME1-206ENST00000487026 QKIQ96PU8 341 aaKnown RBP eCLIP24.15■■□□□ 1.46
LIME1-206ENST00000487026 TEFMQ96QE5 360 aaKnown RBP24.15■■□□□ 1.46
LIME1-206ENST00000487026 EPB41L1Q9H4G0 881 aa24.15■■□□□ 1.46
LIME1-206ENST00000487026 UCK1Q9HA47 277 aa24.15■■□□□ 1.46
LIME1-206ENST00000487026 IL17CQ9P0M4 197 aa24.15■■□□□ 1.46
LIME1-206ENST00000487026 SLC28A2O43868 658 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 UBXN7O94888 489 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 EPOP01588 193 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 AMD1P17707 334 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 ITGB6P18564 788 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 IDSP22304 550 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 TNNT3P45378 269 aaPredicted RBP24.14■■□□□ 1.45
LIME1-206ENST00000487026 NFKB2Q00653 900 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 PTPRCAPQ14761 206 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 SLC1A5Q15758 541 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 SARM1Q6SZW1 724 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 ABRAXAS1Q6UWZ7 409 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 FAM151BQ6UXP7 276 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 CEACAM20Q6UY09 585 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 TIPARPQ7Z3E1 657 aaKnown RBP24.14■■□□□ 1.45
LIME1-206ENST00000487026 UNC5BQ8IZJ1 945 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 TTC25Q96NG3 672 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 TGM7Q96PF1 710 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 TRABDQ9H4I3 376 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 WDR37Q9Y2I8 494 aa24.14■■□□□ 1.45
LIME1-206ENST00000487026 SETXQ7Z333 2677 aaKnown RBP24.14■■□□□ 1.45
LIME1-206ENST00000487026 AGTP01019 485 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms