RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 AFTPHQ6ULP2 937 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 ZNF534Q76KX8 674 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 C17orf82Q86X59 251 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-214ENST00000482733 ZNF547Q8IVP9 402 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 KLHL7Q8IXQ5 586 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 PPIL6Q8IXY8 311 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 CACTIN-AS1Q8N1I8 211 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 RASGEF1AQ8N9B8 481 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 OR13J1Q8NGT2 312 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 MAPK15Q8TD08 544 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.36■□□□□ 0.21
HMGN1-214ENST00000482733 TTC1Q99614 292 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 MRM3Q9HC36 420 aaKnown RBP16.36■□□□□ 0.21
HMGN1-214ENST00000482733 KLC4Q9NSK0 619 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 ZDHHC3Q9NYG2 299 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 ASIC3Q9UHC3 531 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 ARID1BQ8NFD5 2236 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-214ENST00000482733 SCN8AQ9UQD0 1980 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 SPTBN2O15020 2390 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 TDRD6O60522 2096 aaKnown RBP16.35■□□□□ 0.21
HMGN1-214ENST00000482733 CCDC78A2IDD5 438 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 OR5K4A6NMS3 321 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 ZW10O43264 779 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 OPA1O60313 960 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 ACRV1P26436 265 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 CA5AP35218 305 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 PTGIRP43119 386 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 ARSDP51689 593 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 TERF1P54274 439 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 BIRC2Q13490 618 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 DHX34Q14147 1143 aaKnown RBP16.35■□□□□ 0.21
HMGN1-214ENST00000482733 LYPLAL1Q5VWZ2 237 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 ANKRD22Q5VYY1 191 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 TMEM220Q6QAJ8 160 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 TAS2R42Q7RTR8 314 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 NAT8LQ8N9F0 302 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 AVL9Q8NBF6 648 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 HDAC10Q969S8 669 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 SGSM3Q96HU1 749 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 CCDC3Q9BQI4 270 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 SCNM1Q9BWG6 230 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 CHRAC1Q9NRG0 131 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 KCNK6Q9Y257 313 aa16.35■□□□□ 0.21
HMGN1-214ENST00000482733 NCOR2Q9Y618 2525 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 MAGEB16A2A368 324 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 CCDC162PA2VCL2 907 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 POP7O75817 140 aaKnown RBP16.34■□□□□ 0.21
HMGN1-214ENST00000482733 TMEM63AO94886 807 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 MGAT1P26572 445 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 PPARGP37231 505 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-214ENST00000482733 CTSCP53634 463 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 PRAMEP78395 509 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 INSM1Q01101 510 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-214ENST00000482733 ITIH4Q14624 930 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 BCL7AQ4VC05 210 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 CERS6Q6ZMG9 384 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 C11orf96Q7Z7L8 435 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 CAND1Q86VP6 1230 aaKnown RBP16.34■□□□□ 0.21
HMGN1-214ENST00000482733 HOOK3Q86VS8 718 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 AMZ2Q86W34 360 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 SERPINA9Q86WD7 417 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 NAGSQ8N159 534 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 ARL14Q8N4G2 192 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 CCDC74AQ96AQ1 378 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 C16orf45Q96MC5 204 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-214ENST00000482733 KIFC1Q9BW19 673 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 FAM96AQ9H5X1 160 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 STN1Q9H668 368 aaKnown RBP16.34■□□□□ 0.21
HMGN1-214ENST00000482733 LRIT1Q9P2V4 623 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 TBC1D29Q9UFV1 150 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 SLC23A2Q9UGH3 650 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 SLC2A6Q9UGQ3 507 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 MSRB2Q9Y3D2 182 aa16.34■□□□□ 0.21
HMGN1-214ENST00000482733 IGLV3-16A0A075B6K0 115 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 KIR2DS5A0A0G2JLQ3 304 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 A0A0G2JNG1 304 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 SDR42E2A6NKP2 422 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 OR2AG2A6NM03 316 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 RHPN2P1A8MT19 583 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 KIR2DS3K7RE56 304 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 KIF2AO00139 706 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-214ENST00000482733 SMAPO00193 183 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 DNALI1O14645 258 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-214ENST00000482733 SNX2O60749 519 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 TOP3BO95985 862 aaKnown RBP16.33■□□□□ 0.2
HMGN1-214ENST00000482733 GOT2P00505 430 aaKnown RBP16.33■□□□□ 0.2
HMGN1-214ENST00000482733 F3P13726 295 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 ATP1B2P14415 290 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-214ENST00000482733 JUPP14923 745 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 IDSP22304 550 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 FOXN2P32314 431 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 DMPKQ09013 629 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 KIR2DS5Q14953 304 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 KCTD19Q17RG1 926 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-214ENST00000482733 PLA2G4EQ3MJ16 856 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 FASTKD1Q53R41 847 aaKnown RBP16.33■□□□□ 0.2
HMGN1-214ENST00000482733 AARS2Q5JTZ9 985 aaKnown RBP16.33■□□□□ 0.2
HMGN1-214ENST00000482733 PERM1Q5SV97 790 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 FNBP1LQ5T0N5 605 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 RNASEH2BQ5TBB1 312 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms