RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 SMG9Q9H0W8 520 aaKnown RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 CXorf56Q9H5V9 222 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 ATP13A3Q9H7F0 1226 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 C6orf203Q9P0P8 240 aaPredicted RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 TMEM181Q9P2C4 612 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 HS3ST2Q9Y278 367 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 BTRCQ9Y297 605 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 PPIL1Q9Y3C6 166 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 PRSS21Q9Y6M0 314 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 PRSS51A0A1B0GVH4 220 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 BBIP1A8MTZ0 92 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 MRASO14807 208 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 VPS4BO75351 444 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 LINC00032P0C843 101 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 HLA-FP30511 346 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 ZFP36L2P47974 494 aaKnown RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 ECT2LQ008S8 904 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 GSTA3Q16772 222 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 FUT11Q495W5 492 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 ZFP1Q6P2D0 407 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 PQLC1Q8N2U9 271 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 KLHL23Q8NBE8 558 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 KREMEN2Q8NCW0 462 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 DLG3Q92796 817 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 PAWRQ96IZ0 340 aaKnown RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 EIF2B4Q9UI10 523 aaKnown RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 RIMS3Q9UJD0 308 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 GPR45Q9Y5Y3 372 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 DOCK6Q96HP0 2047 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 NPIPB15A6NHN6 443 aaPredicted RBP11.36□□□□□ -0.59
NUP188-205ENST00000477069 ADH1AP07327 375 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 UROSP10746 265 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 LBPP18428 481 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 EPHA5P54756 1037 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 STX1BP61266 288 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 PCBP2Q15366 365 aaKnown RBP eCLIP11.36□□□□□ -0.59
NUP188-205ENST00000477069 ASTLQ6HA08 431 aaPredicted RBP11.36□□□□□ -0.59
NUP188-205ENST00000477069 TMEM126BQ8IUX1 230 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 DDIASQ8IXT1 998 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 RBFAQ8N0V3 343 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 FAM156AQ8NDB6 213 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 SLC22A17Q8WUG5 538 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.36□□□□□ -0.59
NUP188-205ENST00000477069 ISG20Q96AZ6 181 aaKnown RBP11.36□□□□□ -0.59
NUP188-205ENST00000477069 ROPN1LQ96C74 230 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 ZNF382Q96SR6 550 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 KLHL4Q9C0H6 718 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 SPAG4Q9NPE6 437 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 MAP10Q9P2G4 905 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 APPL1Q9UKG1 709 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 TIMM22Q9Y584 194 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 IRAK3Q9Y616 596 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 PRORSD1PA6NEY8 169 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 MOSPD3O75425 235 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 CXCL14O95715 111 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 C8BP07358 591 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 ZNF7P17097 686 aaPredicted RBP11.36□□□□□ -0.59
NUP188-205ENST00000477069 CAPN3P20807 821 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 STK19P49842 368 aaPredicted RBP11.36□□□□□ -0.59
NUP188-205ENST00000477069 MRPS22P82650 360 aaKnown RBP11.36□□□□□ -0.59
NUP188-205ENST00000477069 GEN1Q17RS7 908 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 MMEL1Q495T6 779 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 OTOP2Q7RTS6 562 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 TSPAN33Q86UF1 283 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 CMTM8Q8IZV2 173 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 MIER2Q8N344 545 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 TMEM199Q8N511 208 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 PDPRQ8NCN5 879 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 TTC16Q8NEE8 873 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 OR56A4Q8NGH8 313 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 OR2T11Q8NH01 316 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 ESAMQ96AP7 390 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 CORO1BQ9BR76 489 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 HGH1Q9BTY7 390 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 CIPCQ9C0C6 399 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 EBF3Q9H4W6 596 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 ASB8Q9H765 288 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 ASAH2Q9NR71 780 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 HCFC1R1Q9NWW0 138 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 BCAP29Q9UHQ4 241 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 GNPTGQ9UJJ9 305 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 PLXNA2O75051 1894 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 GLYATL1P3A0A0U1RQE8 302 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 HGFP14210 728 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 ITGALP20701 1170 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 SERPINA4P29622 427 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 TRIM25Q14258 630 aaKnown RBP11.36□□□□□ -0.59
NUP188-205ENST00000477069 C6orf10Q5SRN2 563 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 LYPLAL1Q5VWZ2 237 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 C22orf39Q6P5X5 142 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 MACC1Q6ZN28 852 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 SPATA19Q7Z5L4 167 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 TICAM1Q8IUC6 712 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 LILRA2Q8N149 483 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 TUBGCP3Q96CW5 907 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 RPL10LQ96L21 214 aaKnown RBP11.36□□□□□ -0.59
NUP188-205ENST00000477069 NR1H4Q96RI1 486 aaPredicted RBP11.36□□□□□ -0.59
NUP188-205ENST00000477069 TUBGCP5Q96RT8 1024 aa11.36□□□□□ -0.59
NUP188-205ENST00000477069 MYCBPQ99417 103 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms