RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 GLOD4Q9HC38 313 aa11.49□□□□□ -0.57
VARS2-208ENST00000477052 MAGEE1Q9HCI5 957 aa11.49□□□□□ -0.57
VARS2-208ENST00000477052 TFR2Q9UP52 801 aa11.49□□□□□ -0.57
VARS2-208ENST00000477052 RGSL1A5PLK6 1076 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 ZNF891A8MT65 544 aaPredicted RBP11.48□□□□□ -0.57
VARS2-208ENST00000477052 CHUKO15111 745 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 POLR1CO15160 346 aaPredicted RBP11.48□□□□□ -0.57
VARS2-208ENST00000477052 CAPN5O15484 640 aaPredicted RBP11.48□□□□□ -0.57
VARS2-208ENST00000477052 ARHGAP6O43182 974 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 UGT1A9O60656 530 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 MTA2O94776 668 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 UBXN7O94888 489 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 CDK14O94921 469 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 VIPP01282 170 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 AMD1P17707 334 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 UGT1A6P19224 532 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 COMTP21964 271 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 UGT1A1P22309 533 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 UGT1A4P22310 534 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 PTPN3P26045 913 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 CD68P34810 354 aaPredicted RBP11.48□□□□□ -0.57
VARS2-208ENST00000477052 DEKP35659 375 aaKnown RBP11.48□□□□□ -0.57
VARS2-208ENST00000477052 CSRP3P50461 194 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 EPHA4P54764 986 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 PPP1CAP62136 330 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 TLE1Q04724 770 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 PTPRCAPQ14761 206 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 CEACAM20Q6UY09 585 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 FAM92BQ6ZTR7 304 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 TMEM26Q6ZUK4 368 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 MICALCLQ6ZW33 695 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 LRRTM4Q86VH4 590 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 GDAP1Q8TB36 358 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 C9orf72Q96LT7 481 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 ZSCAN5AQ9BUG6 496 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 NHEJ1Q9H9Q4 299 aaPredicted RBP11.48□□□□□ -0.57
VARS2-208ENST00000477052 UGT1A7Q9HAW7 530 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 UGT1A10Q9HAW8 530 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 UGT1A8Q9HAW9 530 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 FBXO8Q9NRD0 319 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 ABHD10Q9NUJ1 306 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 SIDT1Q9NXL6 827 aaKnown RBP11.48□□□□□ -0.57
VARS2-208ENST00000477052 PSMD13Q9UNM6 376 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 WDR37Q9Y2I8 494 aa11.48□□□□□ -0.57
VARS2-208ENST00000477052 MN1Q10571 1320 aaPredicted RBP11.47□□□□□ -0.57
VARS2-208ENST00000477052 A0A0A6YYK5 440 aaPredicted RBP11.47□□□□□ -0.57
VARS2-208ENST00000477052 LILRA5A6NI73 299 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 PPP1R12AO14974 1030 aaPredicted RBP11.47□□□□□ -0.57
VARS2-208ENST00000477052 KMOO15229 486 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 RASSF9O75901 435 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 NDST3O95803 873 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 DLGAP3O95886 979 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 SLC2A4P14672 509 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 NFKB1P19838 968 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 NR1D1P20393 614 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 MAP4P27816 1152 aaKnown RBP11.47□□□□□ -0.57
VARS2-208ENST00000477052 CCR10P46092 362 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 MARCKSL1P49006 195 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 DCDC1P59894 354 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 WASHC5Q12768 1159 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 CDC20Q12834 499 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 GPR18Q14330 331 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 PRKD1Q15139 912 aaPredicted RBP11.47□□□□□ -0.57
VARS2-208ENST00000477052 CHRNA6Q15825 494 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 IGFBP7Q16270 282 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 TEX44Q53QW1 395 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 ODF2Q5BJF6 829 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 SIRPB2Q5JXA9 342 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 XKR5Q6UX68 686 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 FAM151BQ6UXP7 276 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 TMEM135Q86UB9 458 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 ZC3H18Q86VM9 953 aaKnown RBP11.47□□□□□ -0.57
VARS2-208ENST00000477052 PLXDC1Q8IUK5 500 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 TRAPPC5Q8IUR0 188 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 RAVER1Q8IY67 606 aaKnown RBP11.47□□□□□ -0.57
VARS2-208ENST00000477052 GALNT6Q8NCL4 622 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 RNF214Q8ND24 703 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 STARD8Q92502 1023 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 KIAA1143Q96AT1 154 aaPredicted RBP11.47□□□□□ -0.57
VARS2-208ENST00000477052 SLC45A3Q96JT2 553 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 CCDC42Q96M95 316 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 TEFMQ96QE5 360 aaKnown RBP11.47□□□□□ -0.57
VARS2-208ENST00000477052 OR6C1Q96RD1 312 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.47□□□□□ -0.57
VARS2-208ENST00000477052 ULBP3Q9BZM4 244 aa11.47□□□□□ -0.57
VARS2-208ENST00000477052 ZNHIT6Q9NWK9 470 aaKnown RBP11.47□□□□□ -0.57
VARS2-208ENST00000477052 SSU72P8A0A1W2PR75 194 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 PRR19A6NJB7 356 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 OR5K4A6NMS3 321 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 K7EM74 188 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 SPOPO43791 374 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 CST8O60676 142 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 MFAP3LO75121 409 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 KIAA0754O94854 1291 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 C9P02748 559 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 FURINP09958 794 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 SFTPCP11686 197 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 XRCC1P18887 633 aaPredicted RBP11.46□□□□□ -0.57
VARS2-208ENST00000477052 PBLDP30039 288 aaPredicted RBP11.46□□□□□ -0.57
VARS2-208ENST00000477052 ARHGAP25P42331 645 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms