RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ARCQ7LC44 396 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 SLFN11Q7Z7L1 901 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 BCORP1Q8N888 145 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 GPT2Q8TD30 523 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 COG1Q8WTW3 980 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 SPOCK2Q92563 424 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 SNX21Q969T3 373 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 CXorf40BQ96DE9 158 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 SPATA32Q96LK8 384 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 PCMTD1Q96MG8 357 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-203ENST00000467533 LRFN5Q96NI6 719 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 IP6K3Q96PC2 410 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 TUBB2BQ9BVA1 445 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 RIOK2Q9BVS4 552 aaKnown RBP10.04□□□□□ -0.8
HDAC3-203ENST00000467533 RMI1Q9H9A7 625 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 KCND1Q9NSA2 647 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 KLC4Q9NSK0 619 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 ZNF624Q9P2J8 865 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-203ENST00000467533 SH3BGRL2Q9UJC5 107 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 SIK3Q9Y2K2 1263 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 MYO7BQ6PIF6 2116 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 C9J4A7 227 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 LDB2O43679 373 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 CAPN1P07384 714 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 SLC9A1P19634 815 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 RENBPP51606 427 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 TPI1P60174 286 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 PPP2R2AP63151 447 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 HSD11B2P80365 405 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 TRAF2Q12933 501 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 RFTN1Q14699 578 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-203ENST00000467533 ASIC2Q16515 512 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 INSCQ1MX18 579 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 DNTTIP2Q5QJE6 756 aaKnown RBP10.03□□□□□ -0.8
HDAC3-203ENST00000467533 PRAMEF17Q5VTA0 474 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 TAF3Q5VWG9 929 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 B3GNTL1Q67FW5 361 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-203ENST00000467533 FCRL6Q6DN72 434 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 KMT5CQ86Y97 462 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 SYTL1Q8IYJ3 562 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 OR8K5Q8NH50 307 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 DNAJB14Q8TBM8 379 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 ZNF501Q96CX3 271 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-203ENST00000467533 SCRN2Q96FV2 425 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 GBP5Q96PP8 586 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 MAP3K3Q99759 626 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 SLC39A8Q9C0K1 460 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 RAB33BQ9H082 229 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 FANCEQ9HB96 536 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 SOHLH2Q9NX45 425 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 KIAA1468Q9P260 1216 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 SEMA5BQ9P283 1151 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 PCDHGB6Q9Y5F9 930 aa10.03□□□□□ -0.8
HDAC3-203ENST00000467533 FAM237AA0A1B0GTK4 181 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 UBA6A0AVT1 1052 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-203ENST00000467533 TLCD2A6NGC4 264 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 OR52A4PA6NMU1 304 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 MASP2O00187 686 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 DFFAO00273 331 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 ZNF202O95125 648 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 RORAP35398 523 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 PBX1P40424 430 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 PTPN9P43378 593 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 ARCN1P48444 511 aaKnown RBP10.02□□□□□ -0.81
HDAC3-203ENST00000467533 CLCNKAP51800 687 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 Q0VFX4 171 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 ABRQ12979 859 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 PTCHD3Q3KNS1 767 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 TDRD12Q587J7 1177 aaKnown RBP10.02□□□□□ -0.81
HDAC3-203ENST00000467533 TMTC4Q5T4D3 741 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 KLHL10Q6JEL2 608 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 SCYL2Q6P3W7 929 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 XKRXQ6PP77 449 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 CRTC3Q6UUV7 619 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 GFRALQ6UXV0 394 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 SPOCD1Q6ZMY3 1216 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 RBM12BQ8IXT5 1001 aaKnown RBP10.02□□□□□ -0.81
HDAC3-203ENST00000467533 D2HGDHQ8N465 521 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 AOPEPQ8N6M6 819 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 JOSD2Q8TAC2 188 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 CPA5Q8WXQ8 436 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 MTFMTQ96DP5 389 aaKnown RBP10.02□□□□□ -0.81
HDAC3-203ENST00000467533 MAGEB10Q96LZ2 347 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-203ENST00000467533 AGAP3Q96P47 875 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 PSKH2Q96QS6 385 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 MCCC1Q96RQ3 725 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-203ENST00000467533 SLC7A5P2Q9GIP4 190 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 CARD9Q9H257 536 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 GOLPH3LQ9H4A5 285 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 SLC40A1Q9NP59 571 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 PCMTD2Q9NV79 361 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 DNAJC16Q9Y2G8 782 aa10.02□□□□□ -0.81
HDAC3-203ENST00000467533 FAM221AA4D161 298 aa10.01□□□□□ -0.81
HDAC3-203ENST00000467533 C2CD4BA6NLJ0 364 aa10.01□□□□□ -0.81
HDAC3-203ENST00000467533 BHMG1C9JSJ3 638 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-203ENST00000467533 PCDH17O14917 1159 aa10.01□□□□□ -0.81
HDAC3-203ENST00000467533 FANCGO15287 622 aa10.01□□□□□ -0.81
HDAC3-203ENST00000467533 NUAK1O60285 661 aa10.01□□□□□ -0.81
HDAC3-203ENST00000467533 LSM8O95777 96 aaKnown RBP10.01□□□□□ -0.81
HDAC3-203ENST00000467533 GNA14O95837 355 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms