RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 WASH4PA8MWX3 477 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 ECI2O75521 394 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 AGTR2P50052 363 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 CRYBB1P53674 252 aaPredicted RBP12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 OXCT1P55809 520 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 BTG3Q14201 252 aaPredicted RBP12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 CCL15Q16663 113 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 DPY19L1Q2PZI1 675 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 ANKS6Q68DC2 871 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 PAQR3Q6TCH7 311 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 SLC16A12Q6ZSM3 486 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 GPR142Q7Z601 462 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 ZNF467Q7Z7K2 595 aaPredicted RBP12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 NAT16Q8N8M0 369 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 OR13C4Q8NGS5 318 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 PROKR1Q8TCW9 393 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 LPPQ93052 612 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 TADA1Q96BN2 335 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 AARSD1Q9BTE6 412 aaKnown RBP12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 BEGAINQ9BUH8 593 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 TOR3AQ9H497 397 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 NMUR1Q9HB89 426 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 POPDC3Q9HBV1 291 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 ABCC13Q9NSE7 274 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 SLC27A5Q9Y2P5 690 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 MED16Q9Y2X0 877 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 PCDHB3Q9Y5E6 796 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 PCDHGA8Q9Y5G5 932 aa12.88□□□□□ -0.35
PDZRN3-205ENST00000466780 LOC285095A0A1B0GVY8 99 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 ENPP3O14638 875 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 AXIN1O15169 862 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 BCAS1O75363 584 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 IST1P53990 364 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 MLLT6P55198 1093 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 MFSD10Q14728 455 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 SKIV2LQ15477 1246 aaKnown RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 TSNQ15631 228 aaKnown RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 IMPG1Q17R60 797 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 PAN2Q504Q3 1202 aaKnown RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 RBM48Q5RL73 367 aaKnown RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 DLEU7Q6UYE1 221 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 USP50Q70EL3 339 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 PIWIL3Q7Z3Z3 882 aaKnown RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 HID1Q8IV36 788 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 CLEC4FQ8N1N0 589 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 UMODL1-AS1Q8N2C9 162 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 FAM86B1Q8N7N1 296 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 GPR150Q8NGU9 434 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 ZC3H15Q8WU90 426 aaKnown RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 NUDT8Q8WV74 236 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 PSMG2Q969U7 264 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 NRBF2Q96F24 287 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 PKMYT1Q99640 499 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 TINF2Q9BSI4 451 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 FUNDC2Q9BWH2 189 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 RNF112Q9ULX5 631 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 DGKBQ9Y6T7 804 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 FAM234BA2RU67 622 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 CDC7O00311 574 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 SNX2O60749 519 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 DEAF1O75398 565 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 THP07101 528 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 MTPNP58546 118 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 CTU2Q2VPK5 515 aaKnown RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 ANKRD34AQ69YU3 496 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 LAIR2Q6ISS4 152 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 CHDHQ8NE62 594 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 PDZD8Q8NEN9 1154 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 STAG3L4Q8TBR4 150 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 BLOC1S5Q8TDH9 187 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 GTF3C2Q8WUA4 911 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 HDAC2Q92769 488 aaKnown RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 SH3YL1Q96HL8 342 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 MBOAT4Q96T53 435 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 ABHD16BQ9H3Z7 469 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 SMURF2Q9HAU4 748 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 HPS4Q9NQG7 708 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 SEPT3Q9UH03 358 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 MAGEL2Q9UJ55 1249 aa12.87□□□□□ -0.35
PDZRN3-205ENST00000466780 KRBA1A5PL33 1030 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 PIRTP0C851 137 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 HTR1BP28222 390 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 PIGAP37287 484 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 ERVK-8P63133 956 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 MEP1AQ16819 746 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 ALFQ53S48 1182 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 C6orf136Q5SQH8 315 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 LDLRAD1Q5T700 205 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 MRNIPQ6NTE8 343 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 TAF2Q6P1X5 1199 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 ZFAND4Q86XD8 727 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 ZNF683Q8IZ20 524 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 HS3ST5Q8IZT8 346 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 C8orf59Q8N0T1 100 aaPredicted RBP12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 OR10T2Q8NGX3 314 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 ESAMQ96AP7 390 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 ITPKCQ96DU7 683 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 ABHD8Q96I13 439 aa12.86□□□□□ -0.35
PDZRN3-205ENST00000466780 PPM1MQ96MI6 270 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms