RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 GPR39O43194 453 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 PSMD3O43242 534 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 VEGFDO43915 354 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 UGT1A9O60656 530 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 FGGP02679 453 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 HGFP14210 728 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 SLC2A4P14672 509 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 UGT1A6P19224 532 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 UGT1A1P22309 533 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 UGT1A4P22310 534 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 AKT1P31749 480 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 STIP1P31948 543 aaKnown RBP15.18■□□□□ 0.02
VARS-219ENST00000461328 UGT1A3P35503 534 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 UGT1A5P35504 534 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 TMPRSS15P98073 1019 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 ZFP36L1Q07352 338 aaKnown RBP15.18■□□□□ 0.02
VARS-219ENST00000461328 PTPRCAPQ14761 206 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 OASLQ15646 514 aaKnown RBP15.18■□□□□ 0.02
VARS-219ENST00000461328 CLPPQ16740 277 aaPredicted RBP15.18■□□□□ 0.02
VARS-219ENST00000461328 LONRF2Q1L5Z9 754 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 LDLRAP1Q5SW96 308 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 USP53Q70EK8 1073 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 CLEC14AQ86T13 490 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 JAMLQ86YT9 394 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 BRSK1Q8TDC3 778 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 SLC37A2Q8TED4 501 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 TMEM159Q96B96 161 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 CCDC97Q96F63 343 aaPredicted RBP15.18■□□□□ 0.02
VARS-219ENST00000461328 FCRL3Q96P31 734 aaPredicted RBP15.18■□□□□ 0.02
VARS-219ENST00000461328 CMKLR1Q99788 373 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 TLR10Q9BXR5 811 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 SEMA6CQ9H3T2 930 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 PRORYQ9H606 182 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 UGT1A7Q9HAW7 530 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 UGT1A10Q9HAW8 530 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 UGT1A8Q9HAW9 530 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 KLC4Q9NSK0 619 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 KCNK4Q9NYG8 393 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 AKAP7Q9P0M2 348 aaPredicted RBP15.18■□□□□ 0.02
VARS-219ENST00000461328 TBC1D29Q9UFV1 150 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 PISDQ9UG56 409 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 FKBPLQ9UIM3 349 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 DNAJC16Q9Y2G8 782 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 SCN8AQ9UQD0 1980 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 AP2A1O95782 977 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 EML2O95834 649 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 CD1CP29017 333 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 CXCR5P32302 372 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 FDFT1P37268 417 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 FASLGP48023 281 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 CXADRP78310 365 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 KHDC1Q4VXA5 237 aaKnown RBP15.17■□□□□ 0.02
VARS-219ENST00000461328 NKAIN2Q5VXU1 208 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 PPP1R21Q6ZMI0 780 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 GSTA5Q7RTV2 222 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 TMPRSS9Q7Z410 1059 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 SLITRK4Q8IW52 837 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 SFRP1Q8N474 314 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 OR13C4Q8NGS5 318 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 RTP4Q96DX8 246 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 SLC38A3Q99624 504 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 NUDT22Q9BRQ3 303 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 DPH1Q9BZG8 443 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 PIH1D1Q9NWS0 290 aaKnown RBP15.17■□□□□ 0.02
VARS-219ENST00000461328 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.17■□□□□ 0.02
VARS-219ENST00000461328 CRLS1Q9UJA2 301 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 KCTD3Q9Y597 815 aa15.17■□□□□ 0.02
VARS-219ENST00000461328 KIF26BQ2KJY2 2108 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 PDZK1P1A8MUH7 402 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 ZSCAN12O43309 604 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 GAS8O95995 478 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 ZNF7P17097 686 aaPredicted RBP15.16■□□□□ 0.02
VARS-219ENST00000461328 TPH1P17752 444 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 VCLP18206 1134 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 MSH3P20585 1137 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 ITGALP20701 1170 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 HADHAP40939 763 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 UCNP55089 124 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 TMPRSS3P57727 454 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 HHEXQ03014 270 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 TMEM115Q12893 351 aaPredicted RBP15.16■□□□□ 0.02
VARS-219ENST00000461328 POU6F1Q14863 301 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 SEPT7Q16181 437 aaKnown RBP15.16■□□□□ 0.02
VARS-219ENST00000461328 CCNG2Q16589 344 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 GPRC6AQ5T6X5 926 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 KCTD11Q693B1 232 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 DENND5AQ6IQ26 1287 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 GPR155Q7Z3F1 870 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 LINC00523Q86TU6 105 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 ZNF761Q86XN6 746 aaPredicted RBP15.16■□□□□ 0.02
VARS-219ENST00000461328 KLHDC8BQ8IXV7 354 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 DNAAF3Q8N9W5 541 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 DDHD1Q8NEL9 900 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 ZNF398Q8TD17 642 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 DTX3LQ8TDB6 740 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 AHCYL2Q96HN2 611 aaKnown RBP15.16■□□□□ 0.02
VARS-219ENST00000461328 TIMM29Q9BSF4 260 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 ASB8Q9H765 288 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 ETNK1Q9HBU6 452 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 RAB6BQ9NRW1 208 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms