RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 MPOP05164 745 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 CCDC166P0CW27 439 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 MTHFD2P13995 350 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 C5AR1P21730 350 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 XPAP23025 273 aaPredicted RBP8.63□□□□□ -1.03
RIF1-208ENST00000457745 RPS3P23396 243 aaKnown RBP eCLIP8.63□□□□□ -1.03
RIF1-208ENST00000457745 PMLP29590 882 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 ACSL1P33121 698 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 IGFALSP35858 605 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 ADPRHP54922 357 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 POLR2LP62875 67 aaKnown RBP8.63□□□□□ -1.03
RIF1-208ENST00000457745 MRPS21P82921 87 aaKnown RBP8.63□□□□□ -1.03
RIF1-208ENST00000457745 IRF4Q15306 451 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 PDK4Q16654 411 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 C18orf21Q32NC0 220 aaPredicted RBP8.63□□□□□ -1.03
RIF1-208ENST00000457745 TMEM259Q4ZIN3 620 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 LGSNQ5TDP6 509 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 HHATQ5VTY9 493 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 RAPH1Q70E73 1250 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 ISCA2Q86U28 154 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 LMNTD2Q8IXW0 634 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 TRAM1L1Q8N609 369 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 TP53I13Q8NBR0 393 aaPredicted RBP8.63□□□□□ -1.03
RIF1-208ENST00000457745 EEF1AKMT1Q8WVE0 214 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 ZNF75CPQ92670 426 aaPredicted RBP8.63□□□□□ -1.03
RIF1-208ENST00000457745 DLG3Q92796 817 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 ALKBH8Q96BT7 664 aaKnown RBP8.63□□□□□ -1.03
RIF1-208ENST00000457745 NUS1Q96E22 293 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 HHIPQ96QV1 700 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 TCF12Q99081 682 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 NRTNQ99748 197 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 MYOCQ99972 504 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 LMAN1LQ9HAT1 526 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 GPAMQ9HCL2 828 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 TNFRSF12AQ9NP84 129 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 LTB4R2Q9NPC1 389 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 SMOXQ9NWM0 555 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 FBXL12Q9NXK8 326 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 NKIRAS1Q9NYS0 192 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 PKD2L2Q9NZM6 624 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 SIRPGQ9P1W8 387 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 MUTYHQ9UIF7 546 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 ADAMTS6Q9UKP5 1117 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 LRP4O75096 1905 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 A0A1B0GTL3 188 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 A0A1W2PQ67 120 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 A0A1W2PQU0 124 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 OR2AG2A6NM03 316 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 PRMT5O14744 637 aaPredicted RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 SCAMP1O15126 338 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 TM9SF1O15321 606 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 PLRG1O43660 514 aaKnown RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 SYNCRIPO60506 623 aaKnown RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 RNGTTO60942 597 aaKnown RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 ADH1BP00325 375 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 PCCBP05166 539 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 TFEBP19484 476 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 MAT2AP31153 395 aaKnown RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 CCR7P32248 378 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 PTGER3P43115 390 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 POLD2P49005 469 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 PXNP49023 591 aaPredicted RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 TTPAP49638 278 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 KCNC4Q03721 635 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 GABPB1Q06547 395 aaPredicted RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 DMWDQ09019 674 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 BST1Q10588 318 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 OVGP1Q12889 678 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 GBX1Q14549 363 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 TSNQ15631 228 aaKnown RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 CHI3L2Q15782 390 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 CRY1Q16526 586 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 ZXDCQ2QGD7 858 aaPredicted RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 ZNF284Q2VY69 593 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 ERAP2Q6P179 960 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 KIAA1324Q6UXG2 1013 aaKnown RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 ZYG11AQ6WRX3 759 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 CYHR1Q6ZMK1 362 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 MACC1Q6ZN28 852 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 TRIM67Q6ZTA4 783 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 OTOAQ7RTW8 1153 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 MAVSQ7Z434 540 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 CYP2U1Q7Z449 544 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 ADGRG6Q86SQ4 1221 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 SDCCAG8Q86SQ7 713 aaPredicted RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 TAX1BP1Q86VP1 789 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 ZNF547Q8IVP9 402 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 RBFAQ8N0V3 343 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 LSMEM2Q8N112 164 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 SIX5Q8N196 739 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 FAM160A2Q8N612 972 aaPredicted RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 DDHD1Q8NEL9 900 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 ZNF473Q8WTR7 871 aaKnown RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 BTN2A2Q8WVV5 523 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 HMGB4Q8WW32 186 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 EXT2Q93063 718 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 GLYATL1Q969I3 302 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 MAGEB18Q96M61 343 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 LENG8Q96PV6 779 aaPredicted RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 ATOH8Q96SQ7 321 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms