RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 ITGB6P18564 788 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 PMLP29590 882 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 SPRP35270 261 aaPredicted RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 GPR1P46091 355 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 POLD2P49005 469 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 CCR3P51677 355 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 CLCN5P51795 746 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 IRF9Q00978 393 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 CCDC15Q0P6D6 951 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 SGCGQ13326 291 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 MPP2Q14168 576 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 LRRC14Q15048 493 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 GPR33Q49SQ1 333 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 HECTD2Q5U5R9 776 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 NEK5Q6P3R8 708 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 ZNF765Q7L2R6 523 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 DET1Q7L5Y6 550 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 SDCCAG8Q86SQ7 713 aaPredicted RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 CROCCP2Q86T23 111 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 TRIM69Q86WT6 500 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 LMNTD2Q8IXW0 634 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 C4orf33Q8N1A6 199 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 CAMKK1Q8N5S9 505 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 BEND7Q8N7W2 519 aaPredicted RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 GPATCH11Q8N954 259 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 RASGEF1AQ8N9B8 481 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 DTX3LQ8TDB6 740 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 SGF29Q96ES7 293 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 BMFQ96LC9 184 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 ZSCAN5AQ9BUG6 496 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 C11orf16Q9NQ32 467 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 SMOXQ9NWM0 555 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 ZDHHC3Q9NYG2 299 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 SLC39A10Q9ULF5 831 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 TMEM98Q9Y2Y6 226 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 IKBKGQ9Y6K9 419 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 ADAMTS9Q9P2N4 1935 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 ZNF318Q5VUA4 2279 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 LRRC72A6NJI9 287 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 SPAG7O75391 227 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 SLC25A14O95258 325 aaPredicted RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 KRT15P19012 456 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 MAOBP27338 520 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 TRIM23P36406 574 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 TTPAP49638 278 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 CTSCP53634 463 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 MAGOHP61326 146 aaKnown RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 DLG1Q12959 904 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 ITGA9Q13797 1035 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 ZDHHC20Q5W0Z9 365 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 KIAA0895LQ68EN5 471 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 CDHR3Q6ZTQ4 885 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 GALNT7Q86SF2 657 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 ADGRG6Q86SQ4 1221 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 NLRP8Q86W28 1048 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 HEATR4Q86WZ0 1026 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 RAVER1Q8IY67 606 aaKnown RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 SRRM1Q8IYB3 904 aaKnown RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 PLD6Q8N2A8 252 aaKnown RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 RIBC1Q8N443 379 aaPredicted RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 GIMAP7Q8NHV1 300 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 GDAP1Q8TB36 358 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 COX14Q96I36 57 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 ELMO2Q96JJ3 720 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 ATP6V1G3Q96LB4 118 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 VPS35Q96QK1 796 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 TCF12Q99081 682 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 AARSD1Q9BTE6 412 aaKnown RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 UNKQ9C0B0 810 aaKnown RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 PRMT8Q9NR22 394 aaPredicted RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 SNX15Q9NRS6 342 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 INTS10Q9NVR2 710 aaKnown RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 ZNF358Q9NW07 568 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 TXNDC16Q9P2K2 825 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 PNMA8BQ9ULN7 279 aaPredicted RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 WDR87Q6ZQQ6 2873 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 MYO15AQ9UKN7 3530 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 FRYLO94915 3013 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 RRP9O43818 475 aaKnown RBP10.85□□□□□ -0.67
SCN9A-205ENST00000454569 ZNF217O75362 1048 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 KRT38O76015 456 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 PKMP14618 531 aaKnown RBP10.85□□□□□ -0.67
SCN9A-205ENST00000454569 PTGER3P43115 390 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 MAGEA12P43365 314 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 SERPINB9P50453 376 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 CDK3Q00526 305 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 TMEM115Q12893 351 aaPredicted RBP10.85□□□□□ -0.67
SCN9A-205ENST00000454569 AGBL2Q5U5Z8 902 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 XKR5Q6UX68 686 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 CERS6Q6ZMG9 384 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 GCNT7Q6ZNI0 430 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 TIFABQ6ZNK6 161 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 C1orf210Q8IVY1 113 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 SPATA6LQ8N4H0 392 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 DDHD1Q8NEL9 900 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 ANKRD49Q8WVL7 239 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 COPS8Q99627 209 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 TEX101Q9BY14 249 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 CDH19Q9H159 772 aa10.85□□□□□ -0.67
SCN9A-205ENST00000454569 RAD18Q9NS91 495 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms