RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 CCNHP51946 323 aaPredicted RBP11.66□□□□□ -0.54
VTA1-203ENST00000452973 FLOT2Q14254 428 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 TGFBIQ15582 683 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 LPCAT4Q643R3 524 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 LRRC66Q68CR7 880 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 KBTBD2Q8IY47 623 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 CDYL2Q8N8U2 506 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 CHST14Q8NCH0 376 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 GPR26Q8NDV2 337 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 TDP1Q9NUW8 608 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 GAPDHSO14556 408 aaPredicted RBP11.65□□□□□ -0.54
VTA1-203ENST00000452973 TYRP14679 529 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 MRPS22P82650 360 aaKnown RBP11.65□□□□□ -0.54
VTA1-203ENST00000452973 CREB5Q02930 508 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 PTK2BQ14289 1009 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 SQLEQ14534 574 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 MYLK3Q32MK0 819 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 LY6G5CQ5SRR4 150 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 GRASPQ7Z6J2 395 aaPredicted RBP11.65□□□□□ -0.54
VTA1-203ENST00000452973 STK40Q8N2I9 435 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 ZNF366Q8N895 744 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 CYB5D2Q8WUJ1 264 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 ATP6V1E2Q96A05 226 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 ZSWIM3Q96MP5 696 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 MTG2Q9H4K7 406 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 FAM8A1Q9UBU6 413 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 CHD9Q3L8U1 2897 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 OBSL1O75147 1896 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 LTBP2Q14767 1821 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 NR5A2O00482 541 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 HTRA2O43464 458 aaPredicted RBP11.65□□□□□ -0.54
VTA1-203ENST00000452973 FKBP6O75344 327 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 PENKP01210 267 aaPredicted RBP11.65□□□□□ -0.54
VTA1-203ENST00000452973 MYOGP15173 224 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 CLCN4P51793 760 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 MS4A2Q01362 244 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 RALGDSQ12967 914 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 MPP7Q5T2T1 576 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 C22orf39Q6P5X5 142 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 CRTC1Q6UUV9 634 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 IZUMO2Q6UXV1 221 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 CHSY3Q70JA7 882 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 DET1Q7L5Y6 550 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 SYVN1Q86TM6 617 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 ADGRG2Q8IZP9 1017 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 PGAM4Q8N0Y7 254 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 OR52B6Q8NGF0 335 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 SKA2Q8WVK7 121 aaPredicted RBP11.65□□□□□ -0.54
VTA1-203ENST00000452973 TMEM106CQ9BVX2 250 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 P2RY12Q9H244 342 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 LATS2Q9NRM7 1088 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 SLC25A13Q9UJS0 675 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 MAFFQ9ULX9 164 aa11.65□□□□□ -0.54
VTA1-203ENST00000452973 OR4F21O95013 312 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 SNRPB2P08579 225 aaKnown RBP11.65□□□□□ -0.55
VTA1-203ENST00000452973 ADSLP30566 484 aaPredicted RBP11.65□□□□□ -0.55
VTA1-203ENST00000452973 BMPR1AP36894 532 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 INHBCP55103 352 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 HTRA4P83105 476 aaPredicted RBP11.65□□□□□ -0.55
VTA1-203ENST00000452973 STX5Q13190 355 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 RNF111Q6ZNA4 994 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 SNX20Q7Z614 316 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 RBFAQ8N0V3 343 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 CLP1Q92989 425 aaKnown RBP11.65□□□□□ -0.55
VTA1-203ENST00000452973 ERLEC1Q96DZ1 483 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 PLEKHG4BQ96PX9 1271 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 EGFL8Q99944 293 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 C1orf50Q9BV19 199 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 SUV39H2Q9H5I1 410 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 STK39Q9UEW8 545 aa11.65□□□□□ -0.55
VTA1-203ENST00000452973 CAPN8A6NHC0 703 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 FBP2O00757 339 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 SLC22A2O15244 555 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 PTPN2P17706 415 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 ATP6V1C1P21283 382 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 GDF5P43026 501 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 DIO3P55073 304 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 PSME3P61289 254 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 FPGSQ05932 587 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 VPS26BQ4G0F5 336 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 REP15Q6BDI9 236 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 CERS6Q6ZMG9 384 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 BHLHE22Q8NFJ8 381 aaPredicted RBP11.64□□□□□ -0.55
VTA1-203ENST00000452973 ASB2Q96Q27 587 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 PCDHAC1Q9H158 963 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 NSUN3Q9H649 340 aaKnown RBP11.64□□□□□ -0.55
VTA1-203ENST00000452973 NOL11Q9H8H0 719 aaKnown RBP11.64□□□□□ -0.55
VTA1-203ENST00000452973 POLG2Q9UHN1 485 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 ZMYM5Q9UJ78 669 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 ZNF225Q9UK10 706 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 APPL1Q9UKG1 709 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 PCTPQ9UKL6 214 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 ADAMTS6Q9UKP5 1117 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 DHRS7Q9Y394 339 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 MYO9BQ13459 2157 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 E7ENX8 843 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 MRASO14807 208 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 SOCS5O75159 536 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 MTX2O75431 263 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 PABPC1P11940 636 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms