RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 CASS4Q9NQ75 786 aa15.88■□□□□ 0.13
SCAMP4-205ENST00000452128 WASH6PQ9NQA3 447 aa15.88■□□□□ 0.13
SCAMP4-205ENST00000452128 PRDM8Q9NQV8 689 aa15.88■□□□□ 0.13
SCAMP4-205ENST00000452128 NLE1Q9NVX2 485 aaPredicted RBP15.88■□□□□ 0.13
SCAMP4-205ENST00000452128 NEU2Q9Y3R4 380 aa15.88■□□□□ 0.13
SCAMP4-205ENST00000452128 IGLV3-16A0A075B6K0 115 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 PMS2P1A4D2B8 440 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 USP27XA6NNY8 438 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 TLX3O43711 291 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 PRAMEF1O95521 474 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 IFNB1P01574 187 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 CCKBRP32239 447 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 PDE1BQ01064 536 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 DMPKQ09013 629 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 ITGA9Q13797 1035 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 CYP1B1Q16678 543 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 CLPPQ16740 277 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 ZNF658BQ4V348 819 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 AGAP9Q5VTM2 703 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 TTC27Q6P3X3 843 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 LRRTM4Q86VH4 590 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 SLC35F6Q8N357 371 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 TAB3Q8N5C8 712 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 OR52K1Q8NGK4 314 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 COG1Q8WTW3 980 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 NXPE2Q96DL1 559 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 CDKN2AIPNLQ96HQ2 116 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 MS4A14Q96JA4 679 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 PBKQ96KB5 322 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 DNAJC1Q96KC8 554 aaKnown RBP15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 SARS2Q9NP81 518 aaKnown RBP15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 ASCL3Q9NQ33 180 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 KLC4Q9NSK0 619 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 PIH1D1Q9NWS0 290 aaKnown RBP15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 PAK5Q9P286 719 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 ZNF624Q9P2J8 865 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 PDP2Q9P2J9 529 aa15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 DNMT3AQ9Y6K1 912 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-205ENST00000452128 TRBV23OR9-2A0A075B6M9 112 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 IGHV1OR21-1A0A087WYE8 117 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 CCL22O00626 93 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 ZSCAN12O43309 604 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 BRINP1O60477 761 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 F3P13726 295 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 XRCC1P18887 633 aaPredicted RBP15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 CDKN1CP49918 316 aaPredicted RBP15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 ARSDP51689 593 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 ACVR1Q04771 509 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 SPIDRQ14159 915 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 LONRF2Q1L5Z9 754 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 CRTC3Q6UUV7 619 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 LINC00523Q86TU6 105 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 PIANPQ8IYJ0 282 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 STYXQ8WUJ0 223 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 LIN37Q96GY3 246 aaPredicted RBP15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 SLC46A1Q96NT5 459 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 GFM1Q96RP9 751 aaKnown RBP15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 POLR1BQ9H9Y6 1135 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 EIF2B3Q9NR50 452 aaKnown RBP15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 RAB6BQ9NRW1 208 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 HOMER3Q9NSC5 361 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 RIMKLBQ9ULI2 386 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 ATXN7L1Q9ULK2 861 aaPredicted RBP15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 PCDHGA8Q9Y5G5 932 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 KIF26BQ2KJY2 2108 aa15.86■□□□□ 0.13
SCAMP4-205ENST00000452128 A0A087WV48 116 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 KIR2DS5A0A0G2JLQ3 304 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 A0A0G2JNG1 304 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 RHPN2P1A8MT19 583 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 KIR2DS3K7RE56 304 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 KCNJ13O60928 360 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 POP7O75817 140 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 MPOP05164 745 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 HOXB3P14651 431 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 HADHAP40939 763 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 SLC19A1P41440 591 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 MAGEA6P43360 314 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 POU6F1Q14863 301 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 KIR2DS5Q14953 304 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 KCTD19Q17RG1 926 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 TMEM220Q6QAJ8 160 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 C4orf22Q6V702 233 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 FAM83HQ6ZRV2 1179 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 SNX20Q7Z614 316 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 NXPE1Q8N323 547 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 OR13J1Q8NGT2 312 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 LINC00615Q96LM1 132 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 RANBP9Q96S59 729 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 ASB8Q9H765 288 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 UCK1Q9HA47 277 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 TRMT1Q9NXH9 659 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 PYCARDQ9ULZ3 195 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 WDR37Q9Y2I8 494 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 RAXQ9Y2V3 346 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 ZFYVE26Q68DK2 2539 aa15.85■□□□□ 0.13
SCAMP4-205ENST00000452128 ZFC3H1O60293 1989 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-205ENST00000452128 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-205ENST00000452128 OR5K4A6NMS3 321 aa15.84■□□□□ 0.13
SCAMP4-205ENST00000452128 CDRT15L2A8MXV6 281 aa15.84■□□□□ 0.13
SCAMP4-205ENST00000452128 CES2O00748 559 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms