RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 VAV2P52735 878 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 EPHA4P54764 986 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 TMEM115Q12893 351 aaPredicted RBP12.18□□□□□ -0.46
MSH5-209ENST00000450148 NFATC2Q13469 925 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 PLA2G4EQ3MJ16 856 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 KIAA1614Q5VZ46 1190 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 WDR74Q6RFH5 385 aaPredicted RBP12.18□□□□□ -0.46
MSH5-209ENST00000450148 RANBP10Q6VN20 620 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 CCDC81Q6ZN84 652 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 SLC9B2Q86UD5 537 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 LRRTM4Q86VH4 590 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 AGBL5Q8NDL9 886 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 IPMKQ8NFU5 416 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 OR10G6Q8NH81 332 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 CALR3Q96L12 384 aaKnown RBP12.18□□□□□ -0.46
MSH5-209ENST00000450148 TAAR9Q96RI9 348 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 TIMM29Q9BSF4 260 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 TBC1D10AQ9BXI6 508 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 OSBPL8Q9BZF1 889 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 SEMA4CQ9C0C4 833 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 GBA3Q9H227 469 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 OCIAD1Q9NX40 245 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.18□□□□□ -0.46
MSH5-209ENST00000450148 OGFRQ9NZT2 677 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 HACD3Q9P035 362 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 CPNE7Q9UBL6 633 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 RSPH14Q9UHP6 348 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 CCDC66A2RUB6 948 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 LILRA5A6NI73 299 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 B4E171 279 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 H7C0C1 242 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 BUD23O43709 281 aaKnown RBP12.17□□□□□ -0.46
MSH5-209ENST00000450148 DUX1O43812 170 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 UGT1A9O60656 530 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 CDK14O94921 469 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 AGTP01019 485 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 PYGMP11217 842 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 SLC2A4P14672 509 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 UGT1A6P19224 532 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 UGT1A1P22309 533 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 UGT1A4P22310 534 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 CD82P27701 267 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 UGT1A3P35503 534 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 SPAM1P38567 509 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 TSPAN7P41732 249 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 ATP5OP48047 213 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 CTSCP53634 463 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 OLIG2Q13516 323 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 PTPRCAPQ14761 206 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 CHRNA6Q15825 494 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 INSCQ1MX18 579 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 ANKRD20A2Q5SQ80 823 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 ANKRD20A1Q5TYW2 823 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 ANKRD20A3Q5VUR7 823 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 ABRAXAS1Q6UWZ7 409 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 WASH2PQ6VEQ5 465 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 GLT6D1Q7Z4J2 308 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 KLHDC8BQ8IXV7 354 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 ZNF843Q8N446 348 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 BLOC1S5Q8TDH9 187 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 SH3KBP1Q96B97 665 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 FAM118BQ9BPY3 351 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 SPRY4Q9C004 299 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 UCK1Q9HA47 277 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 UGT1A7Q9HAW7 530 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 UGT1A10Q9HAW8 530 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 UGT1A8Q9HAW9 530 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 WASH6PQ9NQA3 447 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 B3GALT1Q9Y5Z6 326 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 PIKFYVEQ9Y2I7 2098 aa12.17□□□□□ -0.46
MSH5-209ENST00000450148 MN1Q10571 1320 aaPredicted RBP12.16□□□□□ -0.46
MSH5-209ENST00000450148 EIF4E1BA6NMX2 242 aaKnown RBP12.16□□□□□ -0.46
MSH5-209ENST00000450148 C9P02748 559 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 RBP3P10745 1247 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 PSMB4P28070 264 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 CSTF2P33240 577 aaKnown RBP eCLIP12.16□□□□□ -0.46
MSH5-209ENST00000450148 GEMP55040 296 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 RWDD2BP57060 319 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 EIF3EP60228 445 aaKnown RBP12.16□□□□□ -0.46
MSH5-209ENST00000450148 AGAP9Q5VTM2 703 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 DENND5AQ6IQ26 1287 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 XKR5Q6UX68 686 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 FAM151BQ6UXP7 276 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 TMEM26Q6ZUK4 368 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 VASH2Q86V25 355 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 RASGEF1AQ8N9B8 481 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 DDHD1Q8NEL9 900 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 NCSTNQ92542 709 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 ART4Q93070 314 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 AHCYL2Q96HN2 611 aaKnown RBP12.16□□□□□ -0.46
MSH5-209ENST00000450148 FICDQ9BVA6 458 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 DDA1Q9BW61 102 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.16□□□□□ -0.46
MSH5-209ENST00000450148 OSGEPL1Q9H4B0 414 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 STN1Q9H668 368 aaKnown RBP12.16□□□□□ -0.46
MSH5-209ENST00000450148 SMOXQ9NWM0 555 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 AKAP7Q9P0M2 348 aaPredicted RBP12.16□□□□□ -0.46
MSH5-209ENST00000450148 TRIM10Q9UDY6 481 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 DNAJC16Q9Y2G8 782 aa12.16□□□□□ -0.46
MSH5-209ENST00000450148 WDR37Q9Y2I8 494 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms