RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ENDOVQ8N8Q3 282 aaKnown RBP15.51■□□□□ 0.07
SNX13-204ENST00000444712 CHST14Q8NCH0 376 aa15.51■□□□□ 0.07
SNX13-204ENST00000444712 GPR26Q8NDV2 337 aa15.51■□□□□ 0.07
SNX13-204ENST00000444712 BPIFB1Q8TDL5 484 aa15.51■□□□□ 0.07
SNX13-204ENST00000444712 FRS2Q8WU20 508 aa15.51■□□□□ 0.07
SNX13-204ENST00000444712 STMN2Q93045 179 aa15.51■□□□□ 0.07
SNX13-204ENST00000444712 MRGPRX3Q96LB0 322 aa15.51■□□□□ 0.07
SNX13-204ENST00000444712 LENG8Q96PV6 779 aaPredicted RBP15.51■□□□□ 0.07
SNX13-204ENST00000444712 CDCA3Q99618 268 aaPredicted RBP15.51■□□□□ 0.07
SNX13-204ENST00000444712 NUSAP1Q9BXS6 441 aaKnown RBP15.51■□□□□ 0.07
SNX13-204ENST00000444712 SPATS2LQ9NUQ6 558 aaKnown RBP15.51■□□□□ 0.07
SNX13-204ENST00000444712 OBP2AQ9NY56 170 aa15.51■□□□□ 0.07
SNX13-204ENST00000444712 PLXNA2O75051 1894 aa15.51■□□□□ 0.07
SNX13-204ENST00000444712 KIF26AQ9ULI4 1882 aaPredicted RBP15.5■□□□□ 0.07
SNX13-204ENST00000444712 EIF3FO00303 357 aaPredicted RBP15.5■□□□□ 0.07
SNX13-204ENST00000444712 UBDO15205 165 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 RAD51BO15315 384 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 GPR39O43194 453 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 SLC25A14O95258 325 aaPredicted RBP15.5■□□□□ 0.07
SNX13-204ENST00000444712 SIX3O95343 332 aaPredicted RBP15.5■□□□□ 0.07
SNX13-204ENST00000444712 SPINT3P49223 89 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 ATP4BP51164 291 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 DCDC1P59894 354 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 PTSQ03393 145 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 KANK2Q63ZY3 851 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 TMEM215Q68D42 235 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 ADGRD2Q7Z7M1 963 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 CHCHD4Q8N4Q1 142 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 ZBTB2Q8N680 514 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 FBXO27Q8NI29 283 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 ZNF483Q8TF39 744 aaPredicted RBP15.5■□□□□ 0.07
SNX13-204ENST00000444712 C19orf60Q96EN9 201 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 COPS8Q99627 209 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 FAM126AQ9BYI3 521 aaPredicted RBP15.5■□□□□ 0.07
SNX13-204ENST00000444712 NOP53Q9NZM5 478 aaKnown RBP15.5■□□□□ 0.07
SNX13-204ENST00000444712 DKK3Q9UBP4 350 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 B4GALT6Q9UBX8 382 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 IL36AQ9UHA7 158 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 PIKFYVEQ9Y2I7 2098 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 MEI4A8MW99 385 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 GRXCR1A8MXD5 290 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 CRCPO75575 148 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 CHEK2O96017 543 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 CISD3P0C7P0 127 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 LHCGRP22888 699 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 CDH13P55290 713 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 SH3BP2P78314 561 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 TGFBIQ15582 683 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 RPS27LQ71UM5 84 aaKnown RBP15.5■□□□□ 0.07
SNX13-204ENST00000444712 SPNS2Q8IVW8 549 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 OR56A4Q8NGH8 313 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 CCT7Q99832 543 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 CD248Q9HCU0 757 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 KCTD5Q9NXV2 234 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 NFKBIL1Q9UBC1 381 aaPredicted RBP15.5■□□□□ 0.07
SNX13-204ENST00000444712 IKZF3Q9UKT9 509 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 COPG1Q9Y678 874 aaKnown RBP15.5■□□□□ 0.07
SNX13-204ENST00000444712 WASF2Q9Y6W5 498 aa15.5■□□□□ 0.07
SNX13-204ENST00000444712 LOC100653049A0A140TA62 436 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 IQCF5A8MTL0 148 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 A8MX80 341 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 UPK3BL1B0FP48 263 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 UPK3BL2E5RIL1 263 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 KRT34O76011 436 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 C1SP09871 688 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 OR56A5P0C7T3 313 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 UGT1A6P19224 532 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 UGT1A1P22309 533 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 UGT1A4P22310 534 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 XPAP23025 273 aaPredicted RBP15.49■□□□□ 0.07
SNX13-204ENST00000444712 UGT1A3P35503 534 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 UGT1A5P35504 534 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 SLC25A3Q00325 362 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 SNX32Q86XE0 403 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 TRPC4APQ8TEL6 797 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 SMARCD2Q92925 531 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 PPP2R3CQ969Q6 453 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 BOCQ9BWV1 1114 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 SMOXQ9NWM0 555 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 PCTPQ9UKL6 214 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 PRPF19Q9UMS4 504 aaKnown RBP15.49■□□□□ 0.07
SNX13-204ENST00000444712 KIAA1549LQ6ZVL6 1849 aa15.49■□□□□ 0.07
SNX13-204ENST00000444712 IGLV3-16A0A075B6K0 115 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 LEFTY1O75610 366 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 TRIM16O95361 564 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 ENO3P13929 434 aaPredicted RBP15.48■□□□□ 0.07
SNX13-204ENST00000444712 ITGAXP20702 1163 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 FSHRP23945 695 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 NRIP1P48552 1158 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 PKNOX1P55347 436 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 STX1BP61266 288 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 KPNB1Q14974 876 aaKnown RBP15.48■□□□□ 0.07
SNX13-204ENST00000444712 EIF4HQ15056 248 aaKnown RBP15.48■□□□□ 0.07
SNX13-204ENST00000444712 PCBP2Q15366 365 aaKnown RBP eCLIP15.48■□□□□ 0.072e-9■■■■■ 41
SNX13-204ENST00000444712 UGT3A2Q3SY77 523 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 ZNF805Q5CZA5 627 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 C9orf50Q5SZB4 431 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 CLEC6AQ6EIG7 209 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 METTL2BQ6P1Q9 378 aaKnown RBP15.48■□□□□ 0.07
SNX13-204ENST00000444712 TMC5Q6UXY8 1006 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms