RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 MPP4Q96JB8 637 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 WRAP53Q9BUR4 548 aaKnown RBP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 DUSP16Q9BY84 665 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 KBTBD4Q9NVX7 518 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 L1RE1Q9UN81 338 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 MPZL2O60487 215 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 RHBDL3P58872 404 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 FPGSQ05932 587 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 GFOD2Q3B7J2 385 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 NAIF1Q69YI7 327 aaPredicted RBP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 AAGABQ6PD74 315 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SHQ1Q6PI26 577 aaKnown RBP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SLC34A3Q8N130 599 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 ARMC10Q8N2F6 343 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 C11orf65Q8NCR3 313 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 PPTC7Q8NI37 304 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 AKAP1Q92667 903 aaKnown RBP eCLIP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 CERS4Q9HA82 394 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 HHATLQ9HCP6 504 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 ILVBLA1L0T0 632 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ARL5CA6NH57 179 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ANXA2P2A6NMY6 339 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 AZIN1O14977 448 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ANXA2P07355 339 aaKnown RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 GHRHRQ02643 423 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 GRHL2Q6ISB3 625 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ANO7Q6IWH7 933 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 TMC3Q7Z5M5 1100 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 OR4K17Q8NGC6 315 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 HDAC10Q969S8 669 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 C1GALT1C1Q96EU7 318 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 TTYH1Q9H313 450 aaPredicted RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 SIRPGQ9P1W8 387 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF490Q9ULM2 529 aaPredicted RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 MRPL42Q9Y6G3 142 aaKnown RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ALKQ9UM73 1620 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 FADS2P1A8MWK0 482 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 PLD2O14939 933 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 PIGZQ86VD9 579 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 UBE2J2Q8N2K1 259 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 EIF1ADQ8N9N8 165 aaKnown RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 SNIP1Q8TAD8 396 aaKnown RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 C11orf24Q96F05 449 aaPredicted RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 DGAT2Q96PD7 388 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ARHGEF4Q9NR80 690 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 NT5C1B-RDH14C9J2C7 533 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 SLC22A3O75751 556 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 PGAM2P15259 253 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 DRD4P21917 467 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 CACNG1Q06432 222 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ARCQ7LC44 396 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF571Q7Z3V5 609 aaPredicted RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 DENND6BQ8NEG7 585 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF548Q8NEK5 533 aaPredicted RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ATXN2LQ8WWM7 1075 aaKnown RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 TRMOQ9BU70 441 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ATXN2Q99700 1313 aaKnown RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 CBFA2T3O75081 653 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 GJB1P08034 283 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 THRBP10828 461 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 HSD3B1P14060 373 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 MATKP42679 507 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ARRB1P49407 418 aaPredicted RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 NAGLUP54802 743 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 FAAP100Q0VG06 881 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 PUM1Q14671 1186 aaKnown RBP eCLIP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ZBTB2Q8N680 514 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 VANGL1Q8TAA9 524 aaPredicted RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 TDRD1Q9BXT4 1180 aaKnown RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 MAGEL2Q9UJ55 1249 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 BUD23O43709 281 aaKnown RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 PROCP04070 461 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 TSHRP16473 764 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 CTSKP43235 329 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 SLC6A9P48067 706 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 SLC30A8Q8IWU4 369 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 NDNQ99608 321 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 TRPV5Q9NQA5 729 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 CLDND1Q9NY35 253 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 SYN3O14994 580 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ALOX5P09917 674 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 TMEM44Q2T9K0 475 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ALG10BQ5I7T1 473 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 GKN2Q86XP6 184 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 HNRNPLLQ8WVV9 542 aaKnown RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF75CPQ92670 426 aaPredicted RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 SEMA6AQ9H2E6 1030 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 FAM83DQ9H4H8 585 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 MRPS30Q9NP92 439 aaKnown RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 PNO1Q9NRX1 252 aaKnown RBP11.11□□□□□ -0.63
SCN4A-201ENST00000435607 POU2F3Q9UKI9 436 aa11.11□□□□□ -0.63
SCN4A-201ENST00000435607 STBD1O95210 358 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 SYNGR4O95473 234 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 CLDN9O95484 217 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 PVALBP20472 110 aaPredicted RBP11.1□□□□□ -0.63
SCN4A-201ENST00000435607 UBXN11Q5T124 520 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 C1orf189Q5VU69 101 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 SFRP1Q8N474 314 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 PDPRQ8NCN5 879 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms