RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 PDK1Q15118 436 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 SEPT7Q16181 437 aaKnown RBP22.38■■□□□ 1.17
HOMER3-203ENST00000433218 TMEM71Q6P5X7 295 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 SPOCD1Q6ZMY3 1216 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 TMC3Q7Z5M5 1100 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 ZNF547Q8IVP9 402 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 AGBL5Q8NDL9 886 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 CCHCR1Q8TD31 782 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 TRIM44Q96DX7 344 aaPredicted RBP22.38■■□□□ 1.17
HOMER3-203ENST00000433218 TAAR9Q96RI9 348 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 ADGRE3Q9BY15 652 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 CARD9Q9H257 536 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 GLOD4Q9HC38 313 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 KLC4Q9NSK0 619 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 OGFRQ9NZT2 677 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 DNAJC16Q9Y2G8 782 aa22.38■■□□□ 1.17
HOMER3-203ENST00000433218 STMND1H3BQB6 276 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 PPP1R12AO14974 1030 aaPredicted RBP22.37■■□□□ 1.17
HOMER3-203ENST00000433218 KIF5CO60282 957 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 LIFP15018 202 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 MSNP26038 577 aaKnown RBP22.37■■□□□ 1.17
HOMER3-203ENST00000433218 DCDC1P59894 354 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 UBE2IP63279 158 aaKnown RBP22.37■■□□□ 1.17
HOMER3-203ENST00000433218 CDK18Q07002 472 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 WASHC5Q12768 1159 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 TRA2AQ13595 282 aaKnown RBP eCLIP22.37■■□□□ 1.17
HOMER3-203ENST00000433218 CLPPQ16740 277 aaPredicted RBP22.37■■□□□ 1.17
HOMER3-203ENST00000433218 KAZNQ674X7 775 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 AHCYL2Q96HN2 611 aaKnown RBP22.37■■□□□ 1.17
HOMER3-203ENST00000433218 HAUS2Q9NVX0 235 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 SLC39A1Q9NY26 324 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 PDP2Q9P2J9 529 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 PCDHGA3Q9Y5H0 932 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 HECTD1Q9ULT8 2610 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 PIKFYVEQ9Y2I7 2098 aa22.37■■□□□ 1.17
HOMER3-203ENST00000433218 PRR19A6NJB7 356 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 USP27XA6NNY8 438 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 B8ZZF3 427 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 SLC25A14O95258 325 aaPredicted RBP22.36■■□□□ 1.17
HOMER3-203ENST00000433218 ZFXP17010 805 aaPredicted RBP22.36■■□□□ 1.17
HOMER3-203ENST00000433218 NFKB1P19838 968 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 CSTF2P33240 577 aaKnown RBP eCLIP22.36■■□□□ 1.17
HOMER3-203ENST00000433218 COPS2P61201 443 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 NFATC3Q12968 1075 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 TFDP2Q14188 446 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 CLCA4Q14CN2 919 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 TAZQ16635 292 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 TBR1Q16650 682 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 TFDP3Q5H9I0 405 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 KDELC1Q6UW63 502 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 ARHGAP22Q7Z5H3 698 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 RAVER1Q8IY67 606 aaKnown RBP22.36■■□□□ 1.17
HOMER3-203ENST00000433218 OR10G6Q8NH81 332 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 NCSTNQ92542 709 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 GLYATL1Q969I3 302 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 HES6Q96HZ4 224 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 PLEKHG4BQ96PX9 1271 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 HERPUD2Q9BSE4 406 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 C10orf88Q9H8K7 445 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 AKAP7Q9P0M2 348 aaPredicted RBP22.36■■□□□ 1.17
HOMER3-203ENST00000433218 NFKBIL1Q9UBC1 381 aaPredicted RBP22.36■■□□□ 1.17
HOMER3-203ENST00000433218 CPNE7Q9UBL6 633 aa22.36■■□□□ 1.17
HOMER3-203ENST00000433218 CD82P27701 267 aa22.35■■□□□ 1.17
HOMER3-203ENST00000433218 PEX6Q13608 980 aa22.35■■□□□ 1.17
HOMER3-203ENST00000433218 RPS6KA1Q15418 735 aa22.35■■□□□ 1.17
HOMER3-203ENST00000433218 TEX44Q53QW1 395 aa22.35■■□□□ 1.17
HOMER3-203ENST00000433218 MEI1Q5TIA1 1274 aa22.35■■□□□ 1.17
HOMER3-203ENST00000433218 TRAM1L1Q8N609 369 aa22.35■■□□□ 1.17
HOMER3-203ENST00000433218 ALG3Q92685 438 aa22.35■■□□□ 1.17
HOMER3-203ENST00000433218 OXNAD1Q96HP4 312 aaPredicted RBP22.35■■□□□ 1.17
HOMER3-203ENST00000433218 GPR63Q9BZJ6 419 aa22.35■■□□□ 1.17
HOMER3-203ENST00000433218 TRIM4Q9C037 500 aa22.35■■□□□ 1.17
HOMER3-203ENST00000433218 MAGEE1Q9HCI5 957 aa22.35■■□□□ 1.17
HOMER3-203ENST00000433218 SLC30A1Q9Y6M5 507 aa22.35■■□□□ 1.17
HOMER3-203ENST00000433218 RGSL1A5PLK6 1076 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 J3QKU1 62 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 CHUKO15111 745 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 DDX3YO15523 660 aaKnown RBP22.34■■□□□ 1.17
HOMER3-203ENST00000433218 CST8O60676 142 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 NDST3O95803 873 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 BRAFP15056 766 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 ITGB6P18564 788 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 ATP13A5Q4VNC0 1218 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 MICALCLQ6ZW33 695 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 ZC3H18Q86VM9 953 aaKnown RBP22.34■■□□□ 1.17
HOMER3-203ENST00000433218 PHYKPLQ8IUZ5 450 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 NAT14Q8WUY8 206 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 RTP4Q96DX8 246 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 TEKT5Q96M29 485 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 GORASP1Q9BQQ3 440 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 ZSCAN5AQ9BUG6 496 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 DDA1Q9BW61 102 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 SLC12A9Q9BXP2 914 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 RMI1Q9H9A7 625 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 ZNF624Q9P2J8 865 aaPredicted RBP22.34■■□□□ 1.17
HOMER3-203ENST00000433218 PTPN13Q12923 2485 aa22.34■■□□□ 1.17
HOMER3-203ENST00000433218 MN1Q10571 1320 aaPredicted RBP22.33■■□□□ 1.17
HOMER3-203ENST00000433218 hCG_1818297A0A087WSY0 165 aa22.33■■□□□ 1.17
HOMER3-203ENST00000433218 BUD23O43709 281 aaKnown RBP22.33■■□□□ 1.17
HOMER3-203ENST00000433218 PPP2R5EQ16537 467 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms