RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 ZNF354CQ86Y25 554 aa13.38□□□□□ -0.27
SENP3-202ENST00000429205 KLHDC8BQ8IXV7 354 aa13.38□□□□□ -0.27
SENP3-202ENST00000429205 CLP1Q92989 425 aaKnown RBP13.38□□□□□ -0.27
SENP3-202ENST00000429205 WBP2Q969T9 261 aa13.38□□□□□ -0.27
SENP3-202ENST00000429205 PABPC5Q96DU9 382 aaKnown RBP13.38□□□□□ -0.27
SENP3-202ENST00000429205 KLHL5Q96PQ7 755 aa13.38□□□□□ -0.27
SENP3-202ENST00000429205 CYP2S1Q96SQ9 504 aa13.38□□□□□ -0.27
SENP3-202ENST00000429205 ARMC7Q9H6L4 198 aa13.38□□□□□ -0.27
SENP3-202ENST00000429205 ARL8BQ9NVJ2 186 aa13.38□□□□□ -0.27
SENP3-202ENST00000429205 BFARQ9NZS9 450 aa13.38□□□□□ -0.27
SENP3-202ENST00000429205 INSL6Q9Y581 213 aa13.38□□□□□ -0.27
SENP3-202ENST00000429205 WASF2Q9Y6W5 498 aa13.38□□□□□ -0.27
SENP3-202ENST00000429205 A8MX80 341 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 hCG_2039718K7EN88 272 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 BUD23O43709 281 aaKnown RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 GATCO43716 136 aaKnown RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 MAGEC1O60732 1142 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 ALDH1A2O94788 518 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 TPH1P17752 444 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 CORO1AP31146 461 aaKnown RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 RPA3P35244 121 aaPredicted RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 SLC10A7Q0GE19 358 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 TARDBPQ13148 414 aaKnown RBP eCLIP13.37□□□□□ -0.27
SENP3-202ENST00000429205 POLD3Q15054 466 aaPredicted RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 TRMT5Q32P41 509 aaKnown RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 TMEM240Q5SV17 173 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 USP51Q70EK9 711 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 CYS1Q717R9 158 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 GPR65Q8IYL9 337 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 TCAIMQ8N3R3 496 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 FAM109AQ8N4B1 249 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 TXNDC15Q96J42 360 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 NAT9Q9BTE0 207 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 TP63Q9H3D4 680 aaPredicted RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 SMPD4Q9NXE4 827 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 SLC17A6Q9P2U8 582 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 AAR2Q9Y312 384 aaKnown RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 PLXNA4Q9HCM2 1894 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 C15orf38-AP3S2A0A0A6YYH1 394 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 LCHNA4D1U4 455 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 TYROBPO43914 113 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 ICAM2P13598 275 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 VAMP1P23763 118 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 ACVRL1P37023 503 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 ALDH3B2P48448 385 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 ST13P50502 369 aaKnown RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 RPS24P62847 133 aaKnown RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 PRAMEP78395 509 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 PDE1CQ14123 709 aaPredicted RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 SLC1A5Q15758 541 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 ZC3H12BQ5HYM0 836 aaKnown RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 NAPEPLDQ6IQ20 393 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 PGM2L1Q6PCE3 622 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 IKBIPQ70UQ0 350 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 ARPINQ7Z6K5 226 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 STK32CQ86UX6 486 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 ZNF565Q8N9K5 539 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 IPMKQ8NFU5 416 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 HPS1Q92902 700 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 PLD4Q96BZ4 506 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 SERAC1Q96JX3 654 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 SPACA7Q96KW9 195 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 ART5Q96L15 291 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 FCRL3Q96P31 734 aaPredicted RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 SLC22A12Q96S37 553 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 SERINC2Q96SA4 455 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 KLF16Q9BXK1 252 aaPredicted RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 ZNF717Q9BY31 904 aaPredicted RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 PAIP1Q9H074 479 aaKnown RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 EBF3Q9H4W6 596 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 ATP13A3Q9H7F0 1226 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 SP110Q9HB58 689 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 NPHS2Q9NP85 383 aa13.37□□□□□ -0.27
SENP3-202ENST00000429205 UXTQ9UBK9 157 aaPredicted RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 SMG5Q9UPR3 1016 aaKnown RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 ZFP37Q9Y6Q3 630 aaPredicted RBP13.37□□□□□ -0.27
SENP3-202ENST00000429205 ATP6V1G2-DDX39BF2Z307 99 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 ANXA9O76027 345 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 CXCL14O95715 111 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 MT-ND3P03897 115 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 F11P03951 625 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 POLBP06746 335 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 PCSK2P16519 638 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 ZNF23P17027 643 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 CA4P22748 312 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 PPP3CCP48454 512 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 RENBPP51606 427 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 SLC18A1P54219 525 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 PHC1P78364 1004 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 CREMQ03060 361 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 SERINC3Q13530 473 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 TBRG1Q3YBR2 411 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 PARP15Q460N3 678 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 VWA5B1Q5TIE3 1220 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 LINC00299Q6ZSB3 139 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 RASSF3Q86WH2 238 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 KIAA2013Q8IYS2 634 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 ASCC1Q8N9N2 400 aaKnown RBP13.36□□□□□ -0.27
SENP3-202ENST00000429205 ZNF680Q8NEM1 530 aa13.36□□□□□ -0.27
SENP3-202ENST00000429205 C1QTNF7Q9BXJ2 289 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms