RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 FAM83DQ9H4H8 585 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 NCKIPSDQ9NZQ3 722 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 MGRN1O60291 552 aa20.73■□□□□ 0.91
GPC1-202ENST00000420138 XPAP23025 273 aaPredicted RBP20.73■□□□□ 0.91
GPC1-202ENST00000420138 MPSTP25325 297 aa20.73■□□□□ 0.91
GPC1-202ENST00000420138 SERPINB3P29508 390 aa20.73■□□□□ 0.91
GPC1-202ENST00000420138 GALK1P51570 392 aa20.73■□□□□ 0.91
GPC1-202ENST00000420138 KCNJ2P63252 427 aa20.73■□□□□ 0.91
GPC1-202ENST00000420138 ASPHQ12797 758 aa20.73■□□□□ 0.91
GPC1-202ENST00000420138 TUBB3Q13509 450 aa20.73■□□□□ 0.91
GPC1-202ENST00000420138 TSNQ15631 228 aaKnown RBP20.73■□□□□ 0.91
GPC1-202ENST00000420138 HENMT1Q5T8I9 393 aaKnown RBP20.73■□□□□ 0.91
GPC1-202ENST00000420138 PARP9Q8IXQ6 854 aa20.73■□□□□ 0.91
GPC1-202ENST00000420138 PHF21BQ96EK2 531 aa20.73■□□□□ 0.91
GPC1-202ENST00000420138 CDH19Q9H159 772 aa20.73■□□□□ 0.91
GPC1-202ENST00000420138 SMOXQ9NWM0 555 aa20.73■□□□□ 0.91
GPC1-202ENST00000420138 MBD1Q9UIS9 605 aaPredicted RBP20.73■□□□□ 0.91
GPC1-202ENST00000420138 RAP2CQ9Y3L5 183 aa20.73■□□□□ 0.91
GPC1-202ENST00000420138 F8W8V4 182 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 PLK4O00444 970 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 AREL1O15033 823 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 KERAO60938 352 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 APODP05090 189 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 HNRNPLP14866 589 aaKnown RBP eCLIP20.72■□□□□ 0.91
GPC1-202ENST00000420138 NFKBIAP25963 317 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 NSG1P42857 185 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 IL2P60568 153 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 UGT3A1Q6NUS8 523 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 ERAP2Q6P179 960 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 SLC22A9Q8IVM8 553 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 CCNYL1Q8N7R7 359 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 STAG3L4Q8TBR4 150 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 FUBP1Q96AE4 644 aaKnown RBP20.72■□□□□ 0.91
GPC1-202ENST00000420138 LINGO1Q96FE5 620 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 PDLIM5Q96HC4 596 aaKnown RBP20.72■□□□□ 0.91
GPC1-202ENST00000420138 PRR11Q96HE9 360 aaPredicted RBP20.72■□□□□ 0.91
GPC1-202ENST00000420138 COPS8Q99627 209 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 SARS2Q9NP81 518 aaKnown RBP20.72■□□□□ 0.91
GPC1-202ENST00000420138 SAR1AQ9NR31 198 aa20.72■□□□□ 0.91
GPC1-202ENST00000420138 TCF20Q9UGU0 1960 aaKnown RBP20.72■□□□□ 0.91
GPC1-202ENST00000420138 RGSL1A5PLK6 1076 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 C2CD4DB7Z1M9 353 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 UBXN8O00124 270 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 SLC25A14O95258 325 aaPredicted RBP20.71■□□□□ 0.91
GPC1-202ENST00000420138 EPHX1P07099 455 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 IMPDH1P20839 514 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 GPRC6AQ5T6X5 926 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 ALYREFQ86V81 257 aaKnown RBP20.71■□□□□ 0.91
GPC1-202ENST00000420138 ULK4Q96C45 1275 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 L3HYPDHQ96EM0 354 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 SPATA16Q9BXB7 569 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 ILKAPQ9H0C8 392 aaPredicted RBP20.71■□□□□ 0.91
GPC1-202ENST00000420138 ZDHHC2Q9UIJ5 367 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 STON1Q9Y6Q2 735 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 PRUNE2Q8WUY3 3088 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 NPEPPSL1A6NEC2 478 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 FADS2P1A8MWK0 482 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 K7EQS6 105 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 TPBGLP0DKB5 382 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 ITGB6P18564 788 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 SERPINB5P36952 375 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 PREPLQ4J6C6 727 aaPredicted RBP20.71■□□□□ 0.91
GPC1-202ENST00000420138 ZNF678Q5SXM1 525 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 GPR153Q6NV75 609 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 RPS27LQ71UM5 84 aaKnown RBP20.71■□□□□ 0.91
GPC1-202ENST00000420138 CLNKQ7Z7G1 428 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 MMAAQ8IVH4 418 aaKnown RBP20.71■□□□□ 0.91
GPC1-202ENST00000420138 INPP5DQ92835 1189 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 ERLEC1Q96DZ1 483 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 CNDP1Q96KN2 507 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 COQ10AQ96MF6 247 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 GUCD1Q96NT3 240 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 RIOK2Q9BVS4 552 aaKnown RBP20.71■□□□□ 0.91
GPC1-202ENST00000420138 WWP1Q9H0M0 922 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 GSTO2Q9H4Y5 243 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 LATS2Q9NRM7 1088 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 SUN2Q9UH99 717 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 TRIM33Q9UPN9 1127 aa20.71■□□□□ 0.91
GPC1-202ENST00000420138 H0Y858 1186 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 PSMD11O00231 422 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 BTN3A1O00481 513 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 ELFN1P0C7U0 828 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 ADRB3P13945 408 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 TARSP26639 723 aaKnown RBP20.7■□□□□ 0.9
GPC1-202ENST00000420138 KIR2DL1P43626 348 aaPredicted RBP20.7■□□□□ 0.9
GPC1-202ENST00000420138 IDH3AP50213 366 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 PRKAA1Q13131 559 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 AAK1Q2M2I8 961 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 UNC50Q53HI1 259 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 VWA5B1Q5TIE3 1220 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 TXNDC11Q6PKC3 985 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 KIF2BQ8N4N8 673 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 TRAM1L1Q8N609 369 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 DEFB123Q8N688 67 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 MAPK15Q8TD08 544 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 CSGALNACT1Q8TDX6 532 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 HLA-CQ95604 372 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 TUBB6Q9BUF5 446 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 SHCBP1LQ9BZQ2 653 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 LRMDAQ9H2I8 198 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms