RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SLC9B2Q86UD5 537 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 ZNF761Q86XN6 746 aaPredicted RBP16.24■□□□□ 0.19
LINC00404-201ENST00000418660 JAMLQ86YT9 394 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 ZNF547Q8IVP9 402 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 KLHDC8BQ8IXV7 354 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 AVL9Q8NBF6 648 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 OR4D9Q8NGE8 314 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 OR10G6Q8NH81 332 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 SLC35B2Q8TB61 432 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 LRRC45Q96CN5 670 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 TTC25Q96NG3 672 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 APOL2Q9BQE5 337 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 OSGEPL1Q9H4B0 414 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 UGT1A7Q9HAW7 530 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 UGT1A10Q9HAW8 530 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 UGT1A8Q9HAW9 530 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 PRDM8Q9NQV8 689 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 ARL5AQ9Y689 179 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 ITPR1Q14643 2758 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 PRR19A6NJB7 356 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 GAPDHSO14556 408 aaPredicted RBP16.23■□□□□ 0.19
LINC00404-201ENST00000418660 HGSO14964 777 aaPredicted RBP16.23■□□□□ 0.19
LINC00404-201ENST00000418660 NVLO15381 856 aaKnown RBP16.23■□□□□ 0.19
LINC00404-201ENST00000418660 ARHGAP6O43182 974 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 XRCC1P18887 633 aaPredicted RBP16.23■□□□□ 0.19
LINC00404-201ENST00000418660 ITIH1P19827 911 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 SLC5A2P31639 672 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 UCNP55089 124 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 CFHR1Q03591 330 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 NFATC2Q13469 925 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 OLIG2Q13516 323 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 PTPRCAPQ14761 206 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 PARP6Q2NL67 630 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 PLA2G4EQ3MJ16 856 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 LDLRAP1Q5SW96 308 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 TMEM71Q6P5X7 295 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 ARHGEF18Q6ZSZ5 1173 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 CCDC112Q8NEF3 446 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 AHCYL2Q96HN2 611 aaKnown RBP16.23■□□□□ 0.19
LINC00404-201ENST00000418660 CCDC74BQ96LY2 380 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.23■□□□□ 0.19
LINC00404-201ENST00000418660 ZCCHC2Q9C0B9 1178 aaKnown RBP16.23■□□□□ 0.19
LINC00404-201ENST00000418660 ARNT2Q9HBZ2 717 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 CPNE7Q9UBL6 633 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 FEZ2Q9UHY8 353 aaPredicted RBP16.23■□□□□ 0.19
LINC00404-201ENST00000418660 ACSL6Q9UKU0 697 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 GUCA1BQ9UMX6 200 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 R3HDM2Q9Y2K5 976 aaKnown RBP16.23■□□□□ 0.19
LINC00404-201ENST00000418660 SSUH2Q9Y2M2 353 aa16.23■□□□□ 0.19
LINC00404-201ENST00000418660 TCRBV7S2A1N4TA0A589 114 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 AGRPO00253 132 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 DUX1O43812 170 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 KCNJ13O60928 360 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 CRTAMO95727 393 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 VCLP18206 1134 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 CSF2RBP32927 897 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 EPHA4P54764 986 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 TMPRSS3P57727 454 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 UBE2IP63279 158 aaKnown RBP16.22■□□□□ 0.19
LINC00404-201ENST00000418660 PDE1BQ01064 536 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 MSLNQ13421 630 aaPredicted RBP16.22■□□□□ 0.19
LINC00404-201ENST00000418660 GPRC6AQ5T6X5 926 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 DENND5AQ6IQ26 1287 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 ABRAXAS1Q6UWZ7 409 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 C11orf96Q7Z7L8 435 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 TRAPPC5Q8IUR0 188 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 FAM71DQ8N9W8 422 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 DDHD1Q8NEL9 900 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 OR4K2Q8NGD2 314 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 ZNF398Q8TD17 642 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 FCRL3Q96P31 734 aaPredicted RBP16.22■□□□□ 0.19
LINC00404-201ENST00000418660 C19orf43Q9BQ61 176 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 TBL1YQ9BQ87 522 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 B3GNT4Q9C0J1 378 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 SMOXQ9NWM0 555 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 PDP2Q9P2J9 529 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 DNAJC16Q9Y2G8 782 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 LAMA5O15230 3695 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 UNC13CQ8NB66 2214 aa16.22■□□□□ 0.19
LINC00404-201ENST00000418660 KIF26BQ2KJY2 2108 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 ZFC3H1O60293 1989 aaKnown RBP16.21■□□□□ 0.19
LINC00404-201ENST00000418660 PDZK1P1A8MUH7 402 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 GPR39O43194 453 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 PRAMEF1O95521 474 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 METTL18O95568 372 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 THRAP10827 490 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 IDSP22304 550 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 CA5AP35218 305 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 ETV5P41161 510 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 PPM1FP49593 454 aaPredicted RBP16.21■□□□□ 0.19
LINC00404-201ENST00000418660 MAPK10P53779 464 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 CXADRP78310 365 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 CLN3Q13286 438 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 SPARCL1Q14515 664 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 SEL1L2Q5TEA6 688 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 AGAP9Q5VTM2 703 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 KCTD11Q693B1 232 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 WDR74Q6RFH5 385 aaPredicted RBP16.21■□□□□ 0.19
LINC00404-201ENST00000418660 WASH2PQ6VEQ5 465 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 GPR155Q7Z3F1 870 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms