RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 A0A1B0GVG6 124 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 E9PAM4 449 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 STX11O75558 287 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 IGSF6O95976 241 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 RHOQP17081 205 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 PSMA1P25786 263 aaKnown RBP10.97□□□□□ -0.65
HPS4-202ENST00000398145 AQP1P29972 269 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 IFNGR2P38484 337 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 OLIG2Q13516 323 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 ZZZ3Q8IYH5 903 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 ZUFSPQ96AP4 578 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 PRICKLE1Q96MT3 831 aaPredicted RBP10.97□□□□□ -0.65
HPS4-202ENST00000398145 PIGVQ9NUD9 493 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 PHF24Q9UPV7 400 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 EFCAB9A8MZ26 197 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 BCAP31P51572 246 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 YBEYP58557 167 aaPredicted RBP10.96□□□□□ -0.65
HPS4-202ENST00000398145 FAM174BQ3ZCQ3 159 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 MFSD4BQ5TF39 518 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 CHADLQ6NUI6 762 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 NCCRP1Q6ZVX7 275 aaPredicted RBP10.96□□□□□ -0.65
HPS4-202ENST00000398145 FGD2Q7Z6J4 655 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 SLC34A3Q8N130 599 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 CACTIN-AS1Q8N1I8 211 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 DPP10Q8N608 796 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 OR5K1Q8NHB7 308 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 PPTC7Q8NI37 304 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 BTN2A2Q8WVV5 523 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 TMBIM1Q969X1 311 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 ESAMQ96AP7 390 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 SLC45A3Q96JT2 553 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 APOLD1Q96LR9 279 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 EIF2B4Q9UI10 523 aaKnown RBP10.96□□□□□ -0.65
HPS4-202ENST00000398145 PDE4DIPQ5VU43 2346 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 A0A0J9YVX5 310 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 GOT2P00505 430 aaKnown RBP10.96□□□□□ -0.65
HPS4-202ENST00000398145 FABP3P05413 133 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 TFPTP0C1Z6 253 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 CES1P23141 567 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 SLC6A2P23975 617 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 SERPINA4P29622 427 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 CCR10P46092 362 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 STT3AP46977 705 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 CRYBB1P53674 252 aaPredicted RBP10.96□□□□□ -0.65
HPS4-202ENST00000398145 SRP54P61011 504 aaKnown RBP10.96□□□□□ -0.65
HPS4-202ENST00000398145 TRIM40Q6P9F5 258 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 C16orf59Q7L2K0 433 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 GLB1L3Q8NCI6 653 aaPredicted RBP10.96□□□□□ -0.65
HPS4-202ENST00000398145 ATL1Q8WXF7 558 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 ADAM2Q99965 735 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 TINF2Q9BSI4 451 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 C2orf49Q9BVC5 232 aaPredicted RBP10.96□□□□□ -0.65
HPS4-202ENST00000398145 TFB2MQ9H5Q4 396 aaKnown RBP10.96□□□□□ -0.65
HPS4-202ENST00000398145 KLHL1Q9NR64 748 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 TOR4AQ9NXH8 423 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 GMIPQ9P107 970 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 SIX4Q9UIU6 781 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 ANGPT4Q9Y264 503 aa10.96□□□□□ -0.65
HPS4-202ENST00000398145 A0A1W2PP18 115 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 CAPN14A8MX76 684 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 PDHXO00330 501 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 BMP10O95393 424 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 CHRM1P11229 460 aaPredicted RBP10.96□□□□□ -0.66
HPS4-202ENST00000398145 CD36P16671 472 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 MAGEA8P43361 318 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 CSNK2BP67870 215 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 ZNF252P-AS1Q0IIN9 211 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 PAFAH1B3Q15102 231 aaKnown RBP10.96□□□□□ -0.66
HPS4-202ENST00000398145 ANGPT1Q15389 498 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 FAM131AQ6UXB0 335 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 DET1Q7L5Y6 550 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 TAS1R3Q7RTX0 852 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 CRYBG2Q8N1P7 616 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 FCGR1BQ92637 280 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 TMEM169Q96HH4 297 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 BTN2A3PQ96KV6 586 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 SNX27Q96L92 541 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 CITED4Q96RK1 184 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 TMEM209Q96SK2 561 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 LPIN3Q9BQK8 851 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 COPS4Q9BT78 406 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 NLNQ9BYT8 704 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 TM6SF2Q9BZW4 377 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 XYLT2Q9H1B5 865 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 SLC25A13Q9UJS0 675 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 FAM240BA0A1B0GVZ2 78 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 GABRDO14764 452 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 TPD52L2O43399 206 aaKnown RBP10.96□□□□□ -0.66
HPS4-202ENST00000398145 ABCB7O75027 752 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 STK16O75716 305 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 ZSWIM7Q19AV6 140 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 PARP15Q460N3 678 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 ZNF544Q6NX49 715 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 ELMSAN1Q6PJG2 1045 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 LRRC17Q8N6Y2 441 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 KLRG1Q96E93 195 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 PCED1BQ96HM7 432 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 ZFP42Q96MM3 310 aa10.96□□□□□ -0.66
HPS4-202ENST00000398145 ANKRD12Q6UB98 2062 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 BHMG1C9JSJ3 638 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms