RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 KLC4Q9NSK0 619 aa18.74■□□□□ 0.59
PDLIM7-204ENST00000393546 ZDHHC3Q9NYG2 299 aa18.74■□□□□ 0.59
PDLIM7-204ENST00000393546 SLC2A6Q9UGQ3 507 aa18.74■□□□□ 0.59
PDLIM7-204ENST00000393546 KCNK6Q9Y257 313 aa18.74■□□□□ 0.59
PDLIM7-204ENST00000393546 DNMT3AQ9Y6K1 912 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-204ENST00000393546 PLXNB3Q9ULL4 1909 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 TRBV5-4A0A0C4DH59 114 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 CCDC162PA2VCL2 907 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 CFAP99D6REC4 459 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 KCNJ13O60928 360 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 TMEM63AO94886 807 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 VCLP18206 1134 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 CLCNKAP51800 687 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 PRAMEP78395 509 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 CRADDP78560 199 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 ACVR1Q04771 509 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 DHX34Q14147 1143 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 C14orf28Q4W4Y0 310 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 ARMC3Q5W041 872 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 CAND1Q86VP6 1230 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 SERPINA9Q86WD7 417 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 ZNF547Q8IVP9 402 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 NAT8LQ8N9F0 302 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 SPATA4Q8NEY3 305 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 OR6P1Q8NGX9 317 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 ZNF778Q96MU6 729 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 KRT12Q99456 494 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 TTC1Q99614 292 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 TIMM29Q9BSF4 260 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 ABCG4Q9H172 646 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 SLC23A2Q9UGH3 650 aa18.73■□□□□ 0.59
PDLIM7-204ENST00000393546 ZFC3H1O60293 1989 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 MAGEB16A2A368 324 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 SDR42E2A6NKP2 422 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 GOLGA8MH3BSY2 632 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 DNALI1O14645 258 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 HYAL3O43820 417 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 SNX2O60749 519 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 AVILO75366 819 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 POP7O75817 140 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 CDKN1CP49918 316 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 BIRC2Q13490 618 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 PLA2G4EQ3MJ16 856 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 RNASEH2BQ5TBB1 312 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 LYPLAL1Q5VWZ2 237 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 AFTPHQ6ULP2 937 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 JAMLQ86YT9 394 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 GALNT15Q8N3T1 639 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 OR4L1Q8NH43 312 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 SGF29Q96ES7 293 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 KIFC1Q9BW19 673 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 MRM3Q9HC36 420 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 SYBUQ9NX95 663 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 ASXL3Q9C0F0 2248 aa18.72■□□□□ 0.59
PDLIM7-204ENST00000393546 OR51F1A6NGY5 319 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 OR2AG2A6NM03 316 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 KIF2AO00139 706 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 TTI1O43156 1089 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 OPA1O60313 960 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 URI1O94763 535 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 TOP3BO95985 862 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 GOT2P00505 430 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 PRSS56P0CW18 603 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 ATP1B2P14415 290 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 SLC2A4P14672 509 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 GLB1P16278 677 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 ACRV1P26436 265 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 CTSCP53634 463 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 HLTFQ14527 1009 aaKnown RBP eCLIP18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 SMAD1Q15797 465 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 PERM1Q5SV97 790 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 FNBP1LQ5T0N5 605 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 IZUMO3Q5VZ72 239 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 CASC4Q6P4E1 433 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 DET1Q7L5Y6 550 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 AMZ2Q86W34 360 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 TMPRSS12Q86WS5 348 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 C17orf82Q86X59 251 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 SFTPA2Q8IWL1 248 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 PIANPQ8IYJ0 282 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 NAGSQ8N159 534 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 ARL14Q8N4G2 192 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 MAPK15Q8TD08 544 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 ZNF592Q92610 1267 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 SGSM3Q96HU1 749 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 SERPINB12Q96P63 405 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 OSGEPL1Q9H4B0 414 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 SAMD15Q9P1V8 674 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 LRIT1Q9P2V4 623 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 TBC1D29Q9UFV1 150 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 ANAPC5Q9UJX4 755 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 ANGPTL2Q9UKU9 493 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 SOX13Q9UN79 622 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 DNAJC16Q9Y2G8 782 aa18.71■□□□□ 0.59
PDLIM7-204ENST00000393546 TRBV23OR9-2A0A075B6M9 112 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 OR5K4A6NMS3 321 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 NUDT21O43809 227 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 PNLIPP16233 465 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 IDSP22304 550 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms