RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.14□□□□□ -0.15
RTF1-201ENST00000389629 CCL15-CCL14A0A0B4J2E2 113 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 NPEPPSL1A6NEC2 478 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 OR51F1A6NGY5 319 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 EGFRP00533 1210 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 RAP2AP10114 183 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 CCNCP24863 283 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 SLC16A1P53985 500 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 ZNF177Q13360 481 aaPredicted RBP14.14□□□□□ -0.15
RTF1-201ENST00000389629 TP53BP2Q13625 1128 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 CCL15Q16663 113 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 TTLL9Q3SXZ7 439 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 GLB1LQ6UWU2 654 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 SPATA19Q7Z5L4 167 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 TAC4Q86UU9 113 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 KBTBD7Q8WVZ9 684 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 SNX27Q96L92 541 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 ZNF778Q96MU6 729 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 ZNF347Q96SE7 839 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 SPRTNQ9H040 489 aaPredicted RBP14.14□□□□□ -0.15
RTF1-201ENST00000389629 TOR4AQ9NXH8 423 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 BTN3A3O00478 584 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 DAOAP59103 153 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 DSC2Q02487 901 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 FAM131AQ6UXB0 335 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 PIWIL3Q7Z3Z3 882 aaKnown RBP14.14□□□□□ -0.15
RTF1-201ENST00000389629 CTU1Q7Z7A3 348 aaKnown RBP14.14□□□□□ -0.15
RTF1-201ENST00000389629 SELENOMQ8WWX9 145 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 RPL10LQ96L21 214 aaKnown RBP14.14□□□□□ -0.15
RTF1-201ENST00000389629 DCSTAMPQ9H295 470 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 SP140LQ9H930 580 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 hCG_2039718K7EN88 272 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 XPNPEP2O43895 674 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 UGT2B11O75310 529 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 EPN2O95208 641 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 LILRA4P59901 499 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 CRY1Q16526 586 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 SDHAF4Q5VUM1 108 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 CYS1Q717R9 158 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 SNX29P2Q8IUI4 249 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 PTCD2Q8WV60 388 aaKnown RBP14.14□□□□□ -0.15
RTF1-201ENST00000389629 STON2Q8WXE9 905 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 BIRC7Q96CA5 298 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 TSSK3Q96PN8 268 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 AGO3Q9H9G7 860 aaKnown RBP14.14□□□□□ -0.15
RTF1-201ENST00000389629 RIMS3Q9UJD0 308 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 ARAP2Q8WZ64 1704 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 G3V2L1 256 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 NBNO60934 754 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 IL4RP24394 825 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 GGT5P36269 586 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 LCP2Q13094 533 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 SKIV2LQ15477 1246 aaKnown RBP14.13□□□□□ -0.15
RTF1-201ENST00000389629 TSTD2Q5T7W7 516 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 PLEKHM3Q6ZWE6 761 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 LILRA2Q8N149 483 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 YTHDF1Q9BYJ9 559 aaKnown RBP14.13□□□□□ -0.15
RTF1-201ENST00000389629 MUC13Q9H3R2 512 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 MYBPHLA2RUH7 354 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 KRBA1A5PL33 1030 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 TULP3O75386 442 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 ALDH1A2O94788 518 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 FCHO2Q0JRZ9 810 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 LAPTM4AQ15012 233 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 ZSWIM7Q19AV6 140 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 PGM2L1Q6PCE3 622 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 CASP12Q6UXS9 341 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 ANKRD46Q86W74 232 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 VPS35Q96QK1 796 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 MLPHQ9BV36 600 aaPredicted RBP14.13□□□□□ -0.15
RTF1-201ENST00000389629 NAA50Q9GZZ1 169 aaKnown RBP14.13□□□□□ -0.15
RTF1-201ENST00000389629 CPA4Q9UI42 421 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 C7orf72A4D263 438 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 B4GAT1O43505 415 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 OR4F21O95013 312 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 SERPIND1P05546 499 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 CPT1AP50416 773 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 CLCN2P51788 898 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 TMBIM6P55061 237 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 ALDH6A1Q02252 535 aaKnown RBP14.13□□□□□ -0.15
RTF1-201ENST00000389629 MFSD10Q14728 455 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 SLC39A12Q504Y0 691 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 RBM48Q5RL73 367 aaKnown RBP14.13□□□□□ -0.15
RTF1-201ENST00000389629 MINDY2Q8NBR6 621 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 LINGO1Q96FE5 620 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 PPP3R2Q96LZ3 170 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 TDRD1Q9BXT4 1180 aaKnown RBP14.13□□□□□ -0.15
RTF1-201ENST00000389629 IRF2BPLQ9H1B7 796 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 A8MU76 341 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 MATN3O15232 486 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 PLOD3O60568 738 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 CHRM5P08912 532 aaPredicted RBP14.13□□□□□ -0.15
RTF1-201ENST00000389629 IMPDH1P20839 514 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 THPOP40225 353 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 MXD1Q05195 221 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 PHKG1Q16816 387 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 KIAA0930Q6ICG6 404 aaPredicted RBP14.13□□□□□ -0.15
RTF1-201ENST00000389629 ZNF544Q6NX49 715 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 PLET1Q6UQ28 207 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 SYT12Q8IV01 421 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms