RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZNF786Q8N393 782 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 BPIFB1Q8TDL5 484 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 TOX2Q96NM4 488 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 PHPT1Q9NRX4 125 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-202ENST00000377797 RPL26L1Q9UNX3 145 aaKnown RBP14.38□□□□□ -0.11
TCOF1-202ENST00000377797 POLR3HQ9Y535 204 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-202ENST00000377797 A8MT66 165 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 A8MUI8 341 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 TGM5O43548 720 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 DEAF1O75398 565 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-202ENST00000377797 HTR1BP28222 390 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 HPCAL1P37235 193 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 CCT8P50990 548 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 C22orf39Q6P5X5 142 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 IYDQ6PHW0 289 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 SLC39A11Q8N1S5 342 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 OR14C36Q8NHC7 312 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 STARD8Q92502 1023 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 MAGED4Q96JG8 741 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 TSSK3Q96PN8 268 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 AARSD1Q9BTE6 412 aaKnown RBP14.38□□□□□ -0.11
TCOF1-202ENST00000377797 ZNF490Q9ULM2 529 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-202ENST00000377797 ADAM12O43184 909 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 CTSEP14091 401 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 CD68P34810 354 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-202ENST00000377797 ANXA11P50995 505 aaKnown RBP14.37□□□□□ -0.11
TCOF1-202ENST00000377797 PLA2G4EQ3MJ16 856 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 C2CD4AQ8NCU7 369 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-202ENST00000377797 IRF7Q92985 503 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 PCDH12Q9NPG4 1184 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 TAS2R1Q9NYW7 299 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-202ENST00000377797 LRATO95237 230 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 CAPN1P07384 714 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 GLDCP23378 1020 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 IGFBP6P24592 240 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-202ENST00000377797 CXCR2P25025 360 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 GNPDA1P46926 289 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 PTDSS1P48651 473 aaKnown RBP14.37□□□□□ -0.11
TCOF1-202ENST00000377797 CYS1Q717R9 158 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 AHI1Q8N157 1196 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 ITFG1Q8TB96 612 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 KHSRPQ92945 711 aaKnown RBP eCLIP14.37□□□□□ -0.11
TCOF1-202ENST00000377797 BDH2Q9BUT1 245 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 EPB41L4BQ9H329 900 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 AP4S1Q9Y587 144 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 CACNB4O00305 520 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-202ENST00000377797 MTX2O75431 263 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 TMEM220Q6QAJ8 160 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 TPRG1Q6ZUI0 275 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 GPR180Q86V85 440 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 TCAIMQ8N3R3 496 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 OSCP1Q8WVF1 389 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 HERC2P3Q9BVR0 1158 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 SEMA6AQ9H2E6 1030 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 MRM3Q9HC36 420 aaKnown RBP14.37□□□□□ -0.11
TCOF1-202ENST00000377797 IMP3Q9NV31 184 aaKnown RBP14.37□□□□□ -0.11
TCOF1-202ENST00000377797 GEMIN8Q9NWZ8 242 aaKnown RBP14.37□□□□□ -0.11
TCOF1-202ENST00000377797 LRCH1Q9Y2L9 728 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 C9JVG2 144 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 SGTAO43765 313 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 ATP6V1E1P36543 226 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 RFX3P48380 749 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 PEX6Q13608 980 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 TOP1MTQ969P6 601 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 CEP295NLQ96MC4 621 aa14.37□□□□□ -0.11
TCOF1-202ENST00000377797 TM7SF2O76062 418 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 EPN2O95208 641 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 CTSAP10619 480 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 IMPDH1P20839 514 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 INO80DQ53TQ3 878 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-202ENST00000377797 RINLQ6ZS11 566 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 RTN4RL1Q86UN2 441 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-202ENST00000377797 HPS6Q86YV9 775 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 SCML4Q8N228 414 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 CLHC1Q8NHS4 586 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 SPPL2AQ8TCT8 520 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 APOLD1Q96LR9 279 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 RIPOR3Q96MK2 946 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 CHCHD3Q9NX63 227 aaKnown RBP14.36□□□□□ -0.11
TCOF1-202ENST00000377797 PIP5K1BO14986 540 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 UROSP10746 265 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 ERVK-21P61565 698 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 IRX1P78414 480 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-202ENST00000377797 GTF2H2Q13888 395 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 PDGFRLQ15198 375 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 TAZQ16635 292 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 SLC9B1Q4ZJI4 515 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 RALGPS1Q5JS13 557 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 CAPN13Q6MZZ7 669 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-202ENST00000377797 GTF2H2CQ6P1K8 395 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 BRAT1Q6PJG6 821 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 GCNT7Q6ZNI0 430 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 TCEAL8Q8IYN2 117 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 DSELQ8IZU8 1212 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 C12orf76Q8N812 135 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-202ENST00000377797 CXorf40BQ96DE9 158 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 ZNF184Q99676 751 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-202ENST00000377797 LMAN2Q12907 356 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 DMC1Q14565 340 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms